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Report for CCDS41684.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41684.1 Public Homo sapiens 11 KRTAP5-10 24 110 108 CCDS HistoryNCBI Gene:387273Re-query CCDS DB by CCDS ID:41684.1Re-query CCDS DB by GeneID:387273See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41684.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398531.3 ENSP00000381542.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000398531.3Link to Ensembl Protein Viewer:ENSP00000381542.1Re-query CCDS DB by Nucleotide ID:ENST00000398531Re-query CCDS DB by Protein ID:ENSP00000381542
Original member Current member NCBI NM_001012710.2 NP_001012728.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001012710.2Link to Protein Sequence:NP_001012728.1Re-query CCDS DB by Nucleotide ID:NM_001012710Re-query CCDS DB by Protein ID:NP_001012728Link to BLAST:NP_001012728.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012728.1 202 Q6L8G5 202 100% 0 0

Chromosomal Locations for CCDS 41684.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 71565588 71566196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (609 nt):
ATGGGCTGCTGTGGCTGCTCCGGAGGCTGTGGCTCCGGCTGTGGGGGTTGTGGCTCCGGCTGTGGGGGCT
GTGGCTCCGGCTGTGGGGGCTATGGCTCTGGCTGTGGGGGCTGTGGCTCCAGCTGCTGTGTGCCCGTCTG
CTGCTGCAAGCCCGTGTGCTGCTGTGTGCCAGCCTGTTCCTGCTCCAGCTGTGGCTCCTGTGGGGGCTCC
AAGGGGGACTGTGGCTCTTGTGGGGGCTCCAAAGGGGGCTGTGGTTCCTGTGGGGGCTCCAAGGGGGGCT
GTGGCTCCTGTGGGGGCTCCAAGGGGGGCTGTGGTTCTTGTGGGGGCTCCAAGGGGGGCTGTGGCTCCTG
TGGGGGCTCCAAAGGTGGCTGTGGTTCCTGTGGGGGCTCCAAGGGGGGCTGTGGTTCTTGTGGCTGCTCC
CAGTGCAATTGCTGTAAGCCCTGCTGCTGCTCCTCAGGCTGTGGATCCTGCTGCCAGTCCAGCTGCTGCA
ATCCCTGCTGCTGCCAGTCCAGCTGCTGTGTCCCCGTGTGCTGCCAGTCTAGCTGCTGCAAGCCCTGCTG
CTGTCAGTCCAGCTGCTGTGTCCCCGTGTGCTGCCAGTGTAAGATCTGA

Translation (202 aa):
MGCCGCSGGCGSGCGGCGSGCGGCGSGCGGYGSGCGGCGSSCCVPVCCCKPVCCCVPACSCSSCGSCGGS
KGDCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCS
QCNCCKPCCCSSGCGSCCQSSCCNPCCCQSSCCVPVCCQSSCCKPCCCQSSCCVPVCCQCKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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