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Report for CCDS41594.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41594.1 Public Homo sapiens 11 TNNT3 24 110 108 CCDS HistoryNCBI Gene:7140Re-query CCDS DB by CCDS ID:41594.1Re-query CCDS DB by GeneID:7140See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41594.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381589.7 ENSP00000371001.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381589.7Link to Ensembl Protein Viewer:ENSP00000371001.3Re-query CCDS DB by Nucleotide ID:ENST00000381589Re-query CCDS DB by Protein ID:ENSP00000371001
Original member Current member EBI ENST00000641119.1 ENSP00000492914.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641119.1Link to Ensembl Protein Viewer:ENSP00000492914.1Re-query CCDS DB by Nucleotide ID:ENST00000641119Re-query CCDS DB by Protein ID:ENSP00000492914
Original member Current member NCBI NM_001042781.3 NP_001036246.1 Accepted alive Link to Nucleotide Sequence:NM_001042781.3Link to Protein Sequence:NP_001036246.1Re-query CCDS DB by Nucleotide ID:NM_001042781Re-query CCDS DB by Protein ID:NP_001036246Link to BLAST:NP_001036246.1
Original member Current member NCBI NM_001367842.1 NP_001354771.1 Accepted alive Link to Nucleotide Sequence:NM_001367842.1Link to Protein Sequence:NP_001354771.1Re-query CCDS DB by Nucleotide ID:NM_001367842Re-query CCDS DB by Protein ID:NP_001354771Link to BLAST:NP_001354771.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001036246.1 256 P45378-6 256 100% 0 0
NP_001354771.1 256 P45378-6 256 100% 0 0

Chromosomal Locations for CCDS 41594.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 1922875 1922891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1923048 1923061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1923555 1923572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1925099 1925116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1925256 1925276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1926470 1926481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1929810 1929828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1932469 1932514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1933721 1933837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1933931 1934008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1934332 1934445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1934546 1934655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1934829 1934919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1936963 1937003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1938438 1938492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (771 nt):
ATGTCTGACGAGGAAGTTGAACAGGTGGAGGAGCAGTACGAAGAAGAAGAGGAAGCCCAGGAGGAAGCTG
CAGAAGTCCATGAGGAAGTTCATGAACCAGAGGAGAAACCGAGACCCAAACTCACTGCTCCTAAGATCCC
AGAAGGGGAGAAAGTGGACTTCGATGACATCCAGAAGAAGCGTCAGAACAAAGACCTAATGGAGCTCCAG
GCCCTCATCGACAGCCACTTTGAAGCCCGGAAGAAGGAGGAGGAGGAGCTGGTCGCTCTCAAAGAGAGAA
TCGAGAAGCGCCGTGCAGAGAGAGCGGAGCAGCAGAGGATTCGTGCAGAGAAGGAGAGGGAGCGCCAGAA
CAGACTGGCGGAGGAAAAGGCCAGAAGGGAGGAGGAGGATGCCAAGAGGAGGGCAGAGGACGACCTGAAG
AAGAAGAAAGCTCTGTCTTCCATGGGAGCCAACTACAGCAGCTACCTGGCCAAGGCTGACCAGAAGAGAG
GCAAGAAGCAGACAGCCCGGGAAATGAAGAAGAAGATTCTGGCTGAGAGACGCAAGCCGCTCAACATCGA
TCACCTTGGTGAAGACAAACTGAGGGACAAGGCCAAGGAGCTCTGGGAGACCCTGCACCAGCTGGAGATT
GACAAGTTCGAGTTTGGGGAGAAGCTGAAACGCCAGAAATATGACATCACCACGCTCAGGAGCCGCATTG
ACCAGGCCCAGAAGCACAGCAAGAAGGCTGGGACCCCAGCCAAGGGCAAAGTCGGCGGGCGCTGGAAGTA
G

Translation (256 aa):
MSDEEVEQVEEQYEEEEEAQEEAAEVHEEVHEPEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKDLMELQ
ALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLK
KKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLNIDHLGEDKLRDKAKELWETLHQLEI
DKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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