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Report for CCDS41531.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41531.1 Public Homo sapiens 10 ZNF365 24 110 108 CCDS HistoryNCBI Gene:22891Re-query CCDS DB by CCDS ID:41531.1Re-query CCDS DB by GeneID:22891See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41531.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395255.7 ENSP00000378675.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395255.7Link to Ensembl Protein Viewer:ENSP00000378675.3Re-query CCDS DB by Nucleotide ID:ENST00000395255Re-query CCDS DB by Protein ID:ENSP00000378675
Original member Current member NCBI NM_199450.3 NP_955522.1 Accepted alive Link to Nucleotide Sequence:NM_199450.3Link to Protein Sequence:NP_955522.1Re-query CCDS DB by Nucleotide ID:NM_199450Re-query CCDS DB by Protein ID:NP_955522Link to BLAST:NP_955522.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_955522.1 333 Q70YC5-2 333 100% 0 0

Chromosomal Locations for CCDS 41531.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 62376194 62376936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62388396 62388576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62459741 62459797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62479876 62479896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1002 nt):
ATGCAACAGAAGGCTTTTGAGGAAAGCAGATATCCCTGGCAGGAGTCCTTTGAGAATGTTGCTGTGTGCC
TGCCATTACGCTGCCCGAGGTGTGGAGACCATACCAGATTTAGAAGCTTGTCATCCTTGAGGGCCCATCT
GGAGTTCAGTCACAGCTACGAAGAAAGAACCCTCTTGACAAAATGCAGTCTCTTTCCATCCCTCAAAGAC
ACAGACCTAGTCACTTCCTCAGAACTCCTGAAACCGGGAAAATTGCAGAGCAGTGGCAACGTGGTAAAGC
AGAAACCGAGCTATGTTAACTTGTACAGCATTTCACATGAACATTCCAAGGACAGGAAGCCATTTGAGGT
GGTGGCAGAGAGGCCTGTGTCCTATGTGCAGACCTACACTGCCATGGACCTCCATGCAGACTCGCTGGAT
GGGACACGGTCGGGTCCTGGACTGCCCACCTCAGACACCAAAGCTTCTTTCGAGGCACATGTCAGAGAAA
AATTCAATCGAATGGTTGAGGCTGTGGATAGGACCATTGAGAAGAGAATTGATAAACTCACCAAAGAGTT
GGCCCAGAAAACTGCGGAACTGTTGGAAGTTCGGGCAGCTTTTGTGCAGCTGACTCAGAAAAAGCAGGAA
GTTCAGAGACGAGAGCGGGCCTTAAACAGACAGGTGGACGTGGCCGTGGAAATGATAGCTGTACTGAGGC
AACGCCTGACGGAATCTGAGGAGGAGCTTCTTAGGAAAGAAGAAGAAGTTGTCACATTCAACCATTTCCT
GGAAGCGGCAGCTGAGAAGGAGGTTCAAGGGAAAGCCCGGCTCCAGGACTTTATTGAGAATCTGTTACAG
CGGGTAGAACTGGCGGAGAAGCAGCTTGAGTACTATCAGAGCCAGCAGGCCTCTGGCTTTGTCCGTGATC
TCAGCGGGCACGTGAGCTGGAAAGGTGCTGGCGAAGCTCGCCTGGTGTGCCAAAATGACCTGGAATTGGA
GGAGTCTGCGATTGTGGAATAA

Translation (333 aa):
MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKD
TDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLD
GTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQE
VQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQ
RVELAEKQLEYYQSQQASGFVRDLSGHVSWKGAGEARLVCQNDLELEESAIVE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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