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Report for CCDS41527.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41527.1 Public Homo sapiens 10 WASHC2A 24 110 108 CCDS HistoryNCBI Gene:387680Re-query CCDS DB by CCDS ID:41527.1Re-query CCDS DB by GeneID:387680See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41527.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000282633.10 ENSP00000282633.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000282633.10Link to Ensembl Protein Viewer:ENSP00000282633.5Re-query CCDS DB by Nucleotide ID:ENST00000282633Re-query CCDS DB by Protein ID:ENSP00000282633
Original member Current member NCBI NM_001005751.3 NP_001005751.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005751.3Link to Protein Sequence:NP_001005751.1Re-query CCDS DB by Nucleotide ID:NM_001005751Re-query CCDS DB by Protein ID:NP_001005751Link to BLAST:NP_001005751.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005751.1 1341 Q641Q2-1 1341 100% 0 0

Chromosomal Locations for CCDS 41527.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 50068006 50068008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50068105 50068227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50069547 50069711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50078675 50078737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50080758 50080931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50084072 50084165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50085497 50085558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50087275 50087322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50090776 50090886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50091431 50091518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50092162 50092233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50093268 50093386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50093860 50093917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50095148 50095207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50095599 50095778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50097675 50097802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50099978 50100064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50104042 50104143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50106334 50106465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50110101 50110270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50113895 50113997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50117906 50118058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50119587 50119769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50125113 50125241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50125369 50125449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50126057 50126179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50127160 50127222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50127583 50127795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50129419 50130039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50130901 50131078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50132806 50132945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4026 nt):
ATGATGAACCGGACGACCCCCGACCAGGAGCTGGCGCCAGCGTCGGAGCCCGTGTGGGAGCGGCCGTGGT
CGGTGGAGGAGATCCGCAGGAGCAGCCAGAGCTGGTCGCTGGCGGCCGACGCGGGCCTACTACAGTTTCT
ACAGGAATTCTCACAGCAAACTATCTCTAGGACCCATGAAATCAAGAAACAAGTGGACGGACTAATTCGG
GAAACCAAAGCCACAGATTGTCGCCTGCATAATGTCTTCAATGACTTCCTTATGCTCTCTAATACCCAGT
TCATTGAGAATCGTGTATATGATGAAGAAGTGGAGGAGCCAGTACTCAAGGCTGAGGCAGAAAAAACAGA
GCAGGAGAAGACACGAGAGCAGAAAGAAGTAGATCTCATTCCTAAAGTCCAGGAGGCTGTGAACTATGGC
TTACAAGTATTGGACAGTGCCTTTGAGCAACTTGATATCAAAGCAGGAAACTCAGACTCCGAGGAAGATG
ATGCTAATGGGCGGGTGGAACTGATCCTTGAACCAAAGGATCTATACATTGATCGTCCTTTACCATATCT
CATTGGGTCAAAGCTGTTCATGGAACAAGAAGATGTAGGTCTTGGAGAGCTGTCCAGTGAAGAAGGCTCT
GTAGGCAGTGATCGTGGCAGTATTGTGGACACTGAGGAAGAGAAAGAAGAGGAGGAGTCAGATGAAGATT
TTGCCCATCATAGTGACAATGAACAAAACCGGCACACCACACAAATGAGTGATGAGGAAGAGGATGATGA
TGGCTGTGACCTTTTCGCTGACTCTGAGAAGGAGGAGGAAGATATTGAGGACATTGAAGAAAATACTAGA
CCTAAAAGAAGCAGACCTACATCGTTTGCAGATGAGCTGGCTGCCCGCATCAAGGGGGATGCCGTGGGTC
GAGTGGACGAGGAGCCGACAACCTTACCCTCAGGAGAAGCAAAACCTCGGAAGACACTCAAAGAGAAGAA
GGAAAGGAGAACTCCTTCAGACGATGAAGAGGATAACTTATTCGCACCCCCCAAGCTGACCGACGAGGAC
TTCTCGCCATTTGGCTCTGGAGGTGGCCTGTTCAGTGGGGGCAAGGGGCTCTTTGATGATGAGGACGAGG
AGAGTGACCTCTTCACGGAAGCCCCCCAGGATCGGCAAGCTGGAGCCTCTGTTAAGGAGGAGTCTTCATC
ATCCAAACCTGGAAAGAAAATCCCAGCAGGAGCTGTTTCTGTATTTTTAGGAGACACGGATGTGTTTGGT
GCTGCCTCCGTTCCATCAATGAAGGAGCCACAGAAGCCTGAGCAGCCCACTCCAAGGAAAAGCCCCTATG
GTCCCCCTCCCACTGGCCTCTTTGATGATGATGATGGTGATGATGATGACGACTTTTTCTCGGCACCCCA
CAGCAAACCTTCTAAAACAGGCAAAGTCCAATCCACTGCCGATATCTTTGGTGACGAAGAAGGAGATCTG
TTCAAAGAAAAAGCCGTAGCATCGCCAGAAGCCACTGTGAGTCAGACAGATGAAAATAAAGCAAGAGCAG
AAAAAAAGGTTACCTTATCTTCCAGCAAAAATCTCAAGCCCTCATCAGAAACAAAGACTCAAAAAGGCTT
ATTTTCAGATGAGGAGGACTCTGAGGATTTGTTTTCTTCTCAAAGTGCGAGTAAGTTAAAAGGTGCGTCT
CTGCTGCCTGGCAAGCTCCCCACGTTGGTTTCCCTGTTTGATGATGAAGATGAAGAGGATAATCTTTTTG
GGGGTACAGCTGCTAAGAAGCAGACATTGTGTCTACAAGCTCAGAGAGAAGAGAAAGCAAAAGCCTCCGA
GCTCTCCAAAAAGAAAGCATCTGCCCTGTTGTTCAGCAGTGATGAGGAGGACCAGTGGAATATTCCTGCT
TCACAGACCCACTTAGCATCTGACAGCAGGTCTAAAGGAGAACCCAGGGATTCTGGGACCCTCCAGAGCC
AGGAGGCCAAGGCTGTGAAAAAGACCAGTCTCTTTGAGGAAGACGAAGAAGATGATCTTTTTGCCATTGC
CAAGGACAGCCAAAAGAAGACCCAGAGAGTGTCACTCCTCTTTGAAGACGATGTTGATAGCGGAGGCTCT
CTGTTTGGCTCTCCTCCCACATCTGTTCCTCCTGCAACAAAGAAAAAAGAGACTGTCTCTGAGGCACCAC
CTTTGCTGTTCAGCGATGAAGAAGAGAAGGAGGCACAACTTGGAGTGAAGTCTGTGGATAAGAAGGTTGA
GAGTGCCAAGGAGTCATTAAAATTTGGGAGAACTGATGTGGCTGAGTCAGAAAAGGAAGGACTTTTGACT
AGATCTGCTCAGGAAACAGTCAAGCATTCTGATTTATTTTCTTCATCATCCCCATGGGACAAAGGAACCA
AGCCTAGAACCAAAACTGTTCTTAGCTTGTTTGATGAGGAAGAGGATAAAATGGAAGATCAAAACATTAT
CCAGGCTCCACAGAAAGAAGTAGGAAAGGGCCGCGATCCTGATGCCCACCCCAAGAGCACAGGTGTCTTC
CAGGATGAAGAGCTGCTTTTCAGCCACAAGCTCCAAAAGGACAATGACCCAGATGTTGACCTTTTTGCTG
GCACCAAAAAAACCAAGCTGTTAGAGCCAAGTGTTGGGAGCCTGTTTGGGGATGATGAAGATGATGATCT
TTTCAGCTCTGCCAAGTCCCAGCCTTTGGTACAAGAGAAAAAGAGAGTAGTGAAAAAAGACCACTCTGTT
GACTCTTTCAAAAACCAGAAACATCCTGAATCCATTCAAGGTAGTAAAGAAAAAGGCATATGGAAGCCGG
AAACACCTCAGGACTCATCAGGTCTCGCTCCATTTAAAACCAAAGAACCATCCACTCGGATCGGGAAGAT
ACAAGCAAATTTAGCGATCAACCCAGCGGCCTTGCTGCCCACAGCGGCTTCCCAGATCTCTGAAGTAAAG
CCTGTTTTGCCAGAATTGGCTTTTCCTTCATCTGAACACAGAAGGAGCCACGGTCTGGAAAGTGTGCCTG
TCCTTCCCGGGAGTGGGGAGGCCGGTGTGAGTTTTGATCTTCCAGCTCAGGCAGACACCTTACACAGTGC
AAACAAGAGCCGTGTCAAGATGAGAGGGAAGCGTAGACCGCAGACCCGTGCAGCTAGGCGGCTGGCTGCT
CAGGAGTCCAGCGAGACTGAGGACATGAGCGTCCCCAGAGGACCCATTGCACAGTGGGCTGATGGCGCCA
TTTCCCCAAATGGCCATCGGCCACAGCTCAGAGCAGCCAGTGGAGAAGACAGCACTGAGGAGGCCCTGGC
AGCTGCCGCTGCACCTTGGGAAGGTGGTCCTGTGCCTGGAGTGGACAGAAGCCCCTTTGCAAAGTCTCTG
GGTCATTCCAGAGGGGAGGCTGACCTTTTTGATTCTGGGGACATCTTTTCCACGGGCACTGGATCTCAGT
CTGTGGAGAGAACAAAACCCAAGGCAAAGATAGCAGAGAATCCTGCCAACCCACCAGTGGGTGGTAAAGC
AAAGAGCCCCATGTTTCCTGCTCTAGGTGAGGCCAGCAGTGATGATGATCTCTTTCAGTCTGCTAAACCA
AAACCAGCAAAGAAAACAAATCCCTTTCCTCTCCTGGAAGATGAGGATGACCTCTTTACAGATCAGAAAG
TCAAGAAGAATGAGACAAAATCCAATAGTCAGCAGGATGTCATATTAACAACACAAGATATTTTTGAGGA
TGATATATTTGCTACGGAAGCAATTAAACCCTCTCAGAAAACCAGAGAGAAGGAGAAAACATTGGAATCT
AATTTATTTGATGATAACATTGATATCTTTGCTGACTTAACTGTAAAACCAAAAGAAAAGTCCAAAAAGA
AAGTGGAAGCCAAGTCTATATTTGATGATGATATGGATGACATCTTCTCCTCTGGTATCCAGGCTAAGAC
AACCAAACCAAAAAGCCGATCTGCACAGGCCGCACCTGAACCAAGATTTGAACACAAGGTGTCCAACATC
TTTGATGATCCCCTGAATGCCTTTGGAGGCCAGTAG

Translation (1341 aa):
MMNRTTPDQELAPASEPVWERPWSVEEIRRSSQSWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIR
ETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPVLKAEAEKTEQEKTREQKEVDLIPKVQEAVNYG
LQVLDSAFEQLDIKAGNSDSEEDDANGRVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGS
VGSDRGSIVDTEEEKEEEESDEDFAHHSDNEQNRHTTQMSDEEEDDDGCDLFADSEKEEEDIEDIEENTR
PKRSRPTSFADELAARIKGDAVGRVDEEPTTLPSGEAKPRKTLKEKKERRTPSDDEEDNLFAPPKLTDED
FSPFGSGGGLFSGGKGLFDDEDEESDLFTEAPQDRQAGASVKEESSSSKPGKKIPAGAVSVFLGDTDVFG
AASVPSMKEPQKPEQPTPRKSPYGPPPTGLFDDDDGDDDDDFFSAPHSKPSKTGKVQSTADIFGDEEGDL
FKEKAVASPEATVSQTDENKARAEKKVTLSSSKNLKPSSETKTQKGLFSDEEDSEDLFSSQSASKLKGAS
LLPGKLPTLVSLFDDEDEEDNLFGGTAAKKQTLCLQAQREEKAKASELSKKKASALLFSSDEEDQWNIPA
SQTHLASDSRSKGEPRDSGTLQSQEAKAVKKTSLFEEDEEDDLFAIAKDSQKKTQRVSLLFEDDVDSGGS
LFGSPPTSVPPATKKKETVSEAPPLLFSDEEEKEAQLGVKSVDKKVESAKESLKFGRTDVAESEKEGLLT
RSAQETVKHSDLFSSSSPWDKGTKPRTKTVLSLFDEEEDKMEDQNIIQAPQKEVGKGRDPDAHPKSTGVF
QDEELLFSHKLQKDNDPDVDLFAGTKKTKLLEPSVGSLFGDDEDDDLFSSAKSQPLVQEKKRVVKKDHSV
DSFKNQKHPESIQGSKEKGIWKPETPQDSSGLAPFKTKEPSTRIGKIQANLAINPAALLPTAASQISEVK
PVLPELAFPSSEHRRSHGLESVPVLPGSGEAGVSFDLPAQADTLHSANKSRVKMRGKRRPQTRAARRLAA
QESSETEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTEEALAAAAAPWEGGPVPGVDRSPFAKSL
GHSRGEADLFDSGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKP
KPAKKTNPFPLLEDEDDLFTDQKVKKNETKSNSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLES
NLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSSGIQAKTTKPKSRSAQAAPEPRFEHKVSNI
FDDPLNAFGGQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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