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Report for CCDS40692.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40692.1 Public Mus musculus 9 Gnb5 23 108 98 CCDS HistoryNCBI Gene:14697Re-query CCDS DB by CCDS ID:40692.1Re-query CCDS DB by GeneID:14697See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40692.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076889.6 ENSMUSP00000076155.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076889.6Link to Ensembl Protein Viewer:ENSMUSP00000076155.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000076889Re-query CCDS DB by Protein ID:ENSMUSP00000076155
Original member Current member EBI ENSMUST00000213990.1 ENSMUSP00000149938.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213990.1Link to Ensembl Protein Viewer:ENSMUSP00000149938.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213990Re-query CCDS DB by Protein ID:ENSMUSP00000149938
Original member Current member NCBI NM_010313.2 NP_034443.1 Accepted alive Link to Nucleotide Sequence:NM_010313.2Link to Protein Sequence:NP_034443.1Re-query CCDS DB by Nucleotide ID:NM_010313Re-query CCDS DB by Protein ID:NP_034443Link to BLAST:NP_034443.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034443.1 395 P62881 395 100% 0 0

Chromosomal Locations for CCDS 40692.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 75311395 75311520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75314272 75314383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75327133 75327269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75331873 75331914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75332809 75332885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75334169 75334301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75335651 75335794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75337271 75337362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75340188 75340236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75343508 75343604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75344481 75344647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75344953 75344964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1188 nt):
ATGTGCGATCAGACCTTCCTGGTTAATGTGTTCGGCTCATGTGACAAATGCTTCAAACAAAGGGCCCTAA
GACCCGTTTTCAAGAAATCTCAACAACTCAACTACTGCTCCACGTGTGCAGAGATCATGGCAACCGATGG
GCTGCACGAGAACGAGACGCTGGCGTCGCTGAAGAGCGAGGCCGAGAGCCTCAAGGGCAAGCTAGAGGAG
GAGCGGGCAAAGCTGCATGACGTGGAGCTACACCAGGTGGCCGAGCGGGTGGAGGCCCTGGGCCAGTTTG
TCATGAAGACCAGAAGGACCCTCAAAGGCCACGGGAACAAAGTCCTGTGCATGGATTGGTGCAAAGACAA
GCGGAGAATCGTGAGCTCCTCACAGGATGGGAAGGTGATTGTCTGGGATTCCTTCACTACGAACAAGGAG
CACGCGGTCACCATGCCTTGCACCTGGGTGATGGCGTGTGCTTACGCGCCATCGGGATGCGCCATTGCTT
GTGGTGGTCTGGATAATAAGTGCTCTGTGTATCCACTGACATTCGACAAGAACGAGAACATGGCCGCCAA
GAAGAAGTCTGTTGCTATGCACACCAACTACCTGTCTGCCTGCAGCTTCACCAACTCTGACATGCAGATT
CTGACAGCCAGCGGGGATGGCACCTGCGCCCTGTGGGATGTGGAAAGTGGACAGCTGTTACAGAGCTTCC
ATGGGCACGGGGCTGACGTCCTCTGCTTGGACCTGGCCCCCTCGGAAACAGGAAACACCTTCGTGTCTGG
GGGTTGTGACAAGAAGGCCATGGTGTGGGACATGCGCTCTGGCCAGTGCGTGCAAGCCTTTGAAACTCAT
GAATCGGATGTCAACAGTGTTCGGTACTACCCCAGTGGGGATGCTTTTGCTTCGGGGTCGGATGATGCCA
CGTGTCGCCTCTATGACCTGAGGGCAGATAGAGAGGTCGCCATCTACTCCAAGGAGAGCATCATATTTGG
CGCCTCGAGTGTGGACTTCTCCCTCAGTGGTCGCCTGCTTTTTGCTGGGTACAATGACTATACCATCAAT
GTCTGGGATGTTCTCAAGGGCTCCCGGGTCTCCATCCTGTTTGGACATGAAAACCGCGTCAGCACTCTGC
GAGTGTCTCCTGATGGGACAGCATTCTGCTCGGGATCATGGGATCACACCCTAAGAGTTTGGGCATAA

Translation (395 aa):
MCDQTFLVNVFGSCDKCFKQRALRPVFKKSQQLNYCSTCAEIMATDGLHENETLASLKSEAESLKGKLEE
ERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKE
HAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQI
LTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETH
ESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTIN
VWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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