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Report for CCDS4053.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4053.1 Public Homo sapiens 5 CKMT2 24 110 108 CCDS HistoryNCBI Gene:1160Re-query CCDS DB by CCDS ID:4053.1Re-query CCDS DB by GeneID:1160See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4053.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254035.9 ENSP00000254035.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254035.9Link to Ensembl Protein Viewer:ENSP00000254035.4Re-query CCDS DB by Nucleotide ID:ENST00000254035Re-query CCDS DB by Protein ID:ENSP00000254035
Original member Current member EBI ENST00000424301.6 ENSP00000404203.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000424301.6Link to Ensembl Protein Viewer:ENSP00000404203.2Re-query CCDS DB by Nucleotide ID:ENST00000424301Re-query CCDS DB by Protein ID:ENSP00000404203
Original member Current member EBI ENST00000437669.5 ENSP00000410289.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000437669.5Link to Ensembl Protein Viewer:ENSP00000410289.1Re-query CCDS DB by Nucleotide ID:ENST00000437669Re-query CCDS DB by Protein ID:ENSP00000410289
Original member Current member NCBI NM_001099735.2 NP_001093205.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001099735.2Link to Protein Sequence:NP_001093205.1Re-query CCDS DB by Nucleotide ID:NM_001099735Re-query CCDS DB by Protein ID:NP_001093205Link to BLAST:NP_001093205.1
Original member Current member NCBI NM_001099736.2 NP_001093206.1 Accepted alive Link to Nucleotide Sequence:NM_001099736.2Link to Protein Sequence:NP_001093206.1Re-query CCDS DB by Nucleotide ID:NM_001099736Re-query CCDS DB by Protein ID:NP_001093206Link to BLAST:NP_001093206.1
Original member Current member NCBI NM_001825.3 NP_001816.2 Accepted alive Link to Nucleotide Sequence:NM_001825.3Link to Protein Sequence:NP_001816.2Re-query CCDS DB by Nucleotide ID:NM_001825Re-query CCDS DB by Protein ID:NP_001816Link to BLAST:NP_001816.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093205.1 419 P17540 419 100% 0 0
NP_001093206.1 419 P17540 419 100% 0 0
NP_001816.2 419 P17540 419 100% 0 0

Chromosomal Locations for CCDS 4053.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 81251133 81251284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81252695 81252893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81254396 81254491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81254993 81255214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81256915 81257000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81257733 81257856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81259120 81259254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81263491 81263616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81266139 81266258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1260 nt):
ATGGCCAGTATCTTTTCTAAGTTGCTAACTGGCCGCAATGCTTCTCTGCTGTTTGCTACCATGGGCACCA
GTGTCCTGACCACCGGGTACCTGCTGAACCGGCAGAAAGTGTGTGCCGAGGTCCGGGAGCAGCCTAGGCT
ATTTCCTCCAAGCGCAGACTACCCAGACCTGCGCAAGCACAACAACTGCATGGCCGAGTGCCTCACCCCC
GCCATTTATGCCAAGCTTCGCAACAAGGTGACACCCAACGGCTACACGCTGGACCAGTGCATCCAGACTG
GAGTGGACAACCCTGGCCACCCCTTCATAAAGACTGTGGGCATGGTGGCTGGTGACGAGGAGTCCTATGA
GGTGTTTGCTGACCTTTTTGACCCCGTCATCAAACTAAGACACAACGGCTATGACCCCAGGGTGATGAAG
CACACAACGGATCTGGATGCATCAAAGATCACCCAAGGGCAGTTCGACGAGCATTACGTGCTGTCTTCTC
GGGTGCGCACTGGCCGCAGCATCCGTGGGCTGAGCCTGCCTCCAGCCTGCACCCGGGCCGAGCGAAGGGA
GGTAGAGAACGTGGCCATCACTGCCCTGGAGGGCCTCAAGGGGGACCTGGCTGGCCGCTACTACAAGCTG
TCCGAGATGACGGAGCAGGACCAGCAGCGGCTCATCGATGACCACTTTCTGTTTGATAAGCCAGTGTCCC
CTTTATTAACATGTGCTGGGATGGCCCGTGACTGGCCAGATGCCAGGGGAATCTGGCATAATTATGATAA
GACATTTCTCATCTGGATAAATGAGGAGGATCACACCAGGGTAATCTCAATGGAAAAAGGAGGCAATATG
AAACGAGTATTTGAGCGATTCTGTCGTGGACTAAAAGAAGTAGAACGGTTAATCCAAGAACGAGGCTGGG
AGTTCATGTGGAATGAGCGCCTAGGATACATTTTGACCTGTCCTTCGAACCTTGGAACAGGACTACGAGC
TGGTGTCCACGTTAGGATCCCAAAGCTCAGCAAGGACCCACGCTTTTCTAAGATCCTGGAAAACCTAAGA
CTCCAGAAGCGTGGCACAGGTGGTGTGGACACTGCCGCGGTCGCAGATGTGTACGACATTTCCAACATAG
ATAGAATTGGTCGATCAGAGGTTGAGCTTGTTCAGATAGTCATCGATGGAGTCAATTACCTGGTGGATTG
TGAAAAGAAGTTGGAGAGAGGCCAAGATATTAAGGTGCCACCCCCTCTGCCTCAGTTTGGCAAAAAGTAA

Translation (419 aa):
MASIFSKLLTGRNASLLFATMGTSVLTTGYLLNRQKVCAEVREQPRLFPPSADYPDLRKHNNCMAECLTP
AIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVGMVAGDEESYEVFADLFDPVIKLRHNGYDPRVMK
HTTDLDASKITQGQFDEHYVLSSRVRTGRSIRGLSLPPACTRAERREVENVAITALEGLKGDLAGRYYKL
SEMTEQDQQRLIDDHFLFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNM
KRVFERFCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKLSKDPRFSKILENLR
LQKRGTGGVDTAAVADVYDISNIDRIGRSEVELVQIVIDGVNYLVDCEKKLERGQDIKVPPPLPQFGKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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