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Report for CCDS40142.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40142.1 Public Mus musculus 7 Zfp747 23 108 98 CCDS HistoryNCBI Gene:269997Re-query CCDS DB by CCDS ID:40142.1Re-query CCDS DB by GeneID:269997See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40142.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000067425.5 ENSMUSP00000070685.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000067425.5Link to Ensembl Protein Viewer:ENSMUSP00000070685.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000067425Re-query CCDS DB by Protein ID:ENSMUSP00000070685
Original member Current member NCBI NM_175560.3 NP_780769.1 Accepted alive Link to Nucleotide Sequence:NM_175560.3Link to Protein Sequence:NP_780769.1Re-query CCDS DB by Nucleotide ID:NM_175560Re-query CCDS DB by Protein ID:NP_780769Link to BLAST:NP_780769.1

Chromosomal Locations for CCDS 40142.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 127373728 127374698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127375389 127375502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127375643 127375826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1269 nt):
ATGGCGCAGGTGATGGCCCCGGGAAGGGCCTCGGTACCGCCTGTGTTCTGTAAACCTGGGACTGTGAGCT
TCGCGGACGTGGCCGTGTACTTCTCCCCGGAGGAGTGGAGGTATCTGCGGCCGGCGCAGAGAGCCCTGTA
CCGAGAGGTGATGCGCGAGACCTACGGTCTCCTGACCTATCTCGACGTCGGATGCGCCAAACCAGCGCTC
ATCAGCTGGGTGGAGGAAGAGTCCGAAGTGTGGGGACCCGGTGCCCAGGATCCAGAGGTGGCCATGTGCA
GGACAGAAGTCCACTCAGATTGCAGGCACGAGAAGGAAAGGAAGAGACCAAGAGAAGAGACTGAAGCAAT
GCAGAAGACATTTTCTCCAGAACCTGGGCAGAAGGAGCCACAACTCTCATTTGCTGTCTCCGCTAGTGGA
ATTCAAGCCACGGTCCTAAGGGCAGACAAGCGTCACGGGTGCCATTTGTGTGGGAAGAGTTTTGCCCGGC
GGTCCACGTTGGAGGCACACATGTACACTCACACAGGTGAAAAGCCGTTTCAGTGCCCAGACTGCAACAA
ACGATTTGGCCGGTATTCTTCCCTGAGCACTCACCGAGCCATACACCGAGGGGAACGGCCGCACCAATGT
CCTGACTGTGGGAAGGGTTTTACCCAGCGGTGCACTTTGGTGGCACACATGTACTCTCACACAGGTGAAA
AGCCGTTTCAGTGCCCAGACTGCAACAAATGCTTCGGCAGGTATTCCTCCCTGAGCATGCACCGAGCCAT
ACACCGAGGGGAACGGCCACACCAGTGTCCTGACTGTGGGAAGGGTTTTACCCAGCGGTGCGCATTGGTG
GAGCACATGTACTCTCACACAGGCGAAAAGTCATTCAATTGCCCTGATTGCTGCAAGTCCTTTGGTCGGC
CATCTTCCCTGAGCAGGCACCGGGCCATACACCTCGAGGAGCGGCCTCATCGCTGCTCTCACTGTGGCAA
GACTTTTACACAGCGCTCTTCACTCACCAGCCATCTCCGTGTCCACACTGGGGAGAAGCCTTACTGTTGT
GCTGATTGTGGACGCTGCTTCAGCCAGCGCTCTAGGCTCCATGAGCACCAGCGAGTGGTACACAGCGGTG
TGACCCCCTTTTCTTGCACTCACTGTGGCAGTGCCTTTGCGGATTCCAAATATCTTCGGCGCCACATGCG
CATCCATACAGGTGAGAAGCCTTATTCATGCCCTGACTGGTCGCTGCTTTCGCCAGGGCACCGAAATTCC
AGCCCATAG

Translation (422 aa):
MAQVMAPGRASVPPVFCKPGTVSFADVAVYFSPEEWRYLRPAQRALYREVMRETYGLLTYLDVGCAKPAL
ISWVEEESEVWGPGAQDPEVAMCRTEVHSDCRHEKERKRPREETEAMQKTFSPEPGQKEPQLSFAVSASG
IQATVLRADKRHGCHLCGKSFARRSTLEAHMYTHTGEKPFQCPDCNKRFGRYSSLSTHRAIHRGERPHQC
PDCGKGFTQRCTLVAHMYSHTGEKPFQCPDCNKCFGRYSSLSMHRAIHRGERPHQCPDCGKGFTQRCALV
EHMYSHTGEKSFNCPDCCKSFGRPSSLSRHRAIHLEERPHRCSHCGKTFTQRSSLTSHLRVHTGEKPYCC
ADCGRCFSQRSRLHEHQRVVHSGVTPFSCTHCGSAFADSKYLRRHMRIHTGEKPYSCPDWSLLSPGHRNS
SP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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