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Report for CCDS39976.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39976.1 Public Mus musculus 7 Mtmr10 23 108 98 CCDS HistoryNCBI Gene:233315Re-query CCDS DB by CCDS ID:39976.1Re-query CCDS DB by GeneID:233315See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39976.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032736.10 ENSMUSP00000032736.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032736.10Link to Ensembl Protein Viewer:ENSMUSP00000032736.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000032736Re-query CCDS DB by Protein ID:ENSMUSP00000032736
Original member NCBI NM_172742.2 NP_766330.2 Updated not alive Link to Nucleotide Sequence:NM_172742.2Link to Protein Sequence:NP_766330.2Re-query CCDS DB by Nucleotide ID:NM_172742Re-query CCDS DB by Protein ID:NP_766330
Current member NCBI NM_172742.3 NP_766330.2 Accepted alive Link to Nucleotide Sequence:NM_172742.3Link to Protein Sequence:NP_766330.2Re-query CCDS DB by Nucleotide ID:NM_172742Re-query CCDS DB by Protein ID:NP_766330Link to BLAST:NP_766330.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766330.2 771 Q7TPM9 771 100% 0 0

Chromosomal Locations for CCDS 39976.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 64287782 64287841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64288339 64288399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64297460 64297596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64299539 64299611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64300540 64300682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64308128 64308218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64314084 64314264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64318091 64318178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64318259 64318347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64319415 64319545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64320565 64320634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64321163 64321233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64326652 64326821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64333312 64333482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64336712 64336894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64337433 64338029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2316 nt):
ATGTTCTCTCTCAAGCCGCCCAGACCCAGCTTCAGGTCCTACCTCCTGCCGCCGGCCCAGACTGACGATA
AGATCAGTTCCGAACCGAAGATTAAAAAGCTGGAGCCGGTCCTTTTGCCAGGAGAAATTGTTGTAAATGA
AGTCAATTTTGTGAGAAAATGCATCGCAACAGACACGAGCCAGTATGATTTGTGGGGCAAGTTGATATGC
AGTAACTTCAAAATTTCCTTTATCACAGATGACCCAATGCCATTACAGAAATTCCATTATAGAAACCTTC
TTCTTGGAGAACATGATGTCCCTTTGACATGTATTGAACAGATTGTCACAGTGAATGACCACAAGAGGAA
ACAGAAAGTCCTAGGTCCCAACCAGAAGCTGAAATTCAATCCAACAGAATTAATTATTTATTGTAAAGAT
TTCCGAATTGTCAGGTTTCGCTTTGATGAGTCCGGTCCTGAAAGTGCCAAGAAGGTATGCCTTGCAATAG
CTCATTATTCCCAGCCAACAGACCTCCAGCTACTCTTTGCATTTGAATATGTTGGGAAAAAATACCACAA
TTCAGCCAACAAGGTTAATGGAGTATCCTCAGGAGGTGGAGGAGTATGGAGTGGAGCTGGCAGTACCGGC
AGCCAGAGGACGCCACTGTTCGAAACTTACTCAGATTGGGACAGAGAGACCAAGAGGACAGGCGCTTCTG
GGTGGAGAGTTTGTTCTATCAACGAGGGTTACATGATATCTACTTGCCTTCCAGAATACTTTGTTGTGCC
AAGTTCACTAGCAGACCAAGACCTGAAGATCTTTTCCCATTCCTTTGTTGGAAGAAGAATGCCATTCTGG
TGCTGGAGCCACTCTAACGGCAGTGCTCTTGTGCGGATGGCCCTCATCAAAGACGCGCTGCAACAGAGGA
AGATTGACCAGAGGATCTGCAATGCCATAACTAAAAGTCATCCACAGAGAAGTGATGTTTACAAGTCAGA
TTTGGATAAGGCTTTGCCCAACATCCAAGAAATACAAGCGGCATTTGTAAAACTTAAGCAACTGTGTGTA
AATGAGCCTTTTGAAGAAACTGAAGAGAAATGGTTGTCTTCACTGGAAAGTACCCGGTGGTTAGAGTACG
TCAGGGCTTTCCTTAAACACTCAGCAGAACTTGTGTACATTCTTGAAAGCCAGCGTCTCTCTGTAGTCCT
GCAAGAGGAGGAAGGCAGAGACTTGAGTTGTCTGGTGGCTTCTCTCATTCAAGTGATGATGGATCCATAC
TTCAGGACAATTACTGGATTTCAGAGTCTGATACAGAAGGAGTGGGTCATGGCGGGCTATCAGTTCCTAG
ACAGATGCAACCACTTGAAGAGGTCAGAGAAAGAGTCTCCTTTATTCTTGCTGTTCTTGGATACCACGTG
GCAGCTGCTCGAGCAGTACCCAGCTGCCTTCGAGTTCTCCGAGACGTACTTAGCAGTGCTGTGTGACAGC
ACCCGGATCTCGCTGTTCGGCACCTTCCTCTTCAACTCTCCTCATCAGCGGGTGAAGCAGAGCACAGAGT
TTGCCATCAGCAAAAACATTCAGCTGGGTGATGAAAAGGGCTTGAAATTCCCCTCAGTGTGGGACTGGGC
TCTTCAGTTCACTGCGAAGGATCGCACTCTTTTCCACAACCCCTTCTACATTGGCAAGAGCACACCTTGT
GTTCAGAACGGCTCCAGGAAGTCTTTTAAGCGCACGAAGAAGAGCTACAGCTCCACACTGAGAGGAATGC
CCTCATGCTTGAAGAATGGGATCATCACTGACCAAGACCTGCTGCCTCGGAGAAACTCCCTCGTCCTGAA
GCTGAAGCCGGACCCGCCTCAGCACACCGACAGCCAGCACAGTGGAGCCGAGCAGTATTTTAAAGAGTGG
TTCTCCAGACCAGCCAACCTACACGGCATTATCCTGCCACGTCTCTCCGGAACACACATAAAATTGTGGA
AACTGTGCTACTTCCGTTGGGTCCCTGAGGCCCAGATCAACCTCGGGGGCTCCATCATGGCCTTCCACAA
GCTCTCTCTCCTGGCTGATGAGGTGGACATGCTGAGCAGGATGCTGAGGCAGCACCGCAGCGGCCCCTTG
GAAGCCTGCTATGCAGAGCTGGACCAGAGCAGGATGTACTTCCGGGCCACGGGGCCACATGACACGCTGG
GGACACCAGAGTTCCTCTCCTCTTCATTTCCATTTTCTCCTGTAGGAAATCTGTGTAGACGAAGCATTTT
AGGAACGCCATTAAGCAAATTTTTAAGTGGGGCCAAAATATGGTTATCTACTGAGACACTAGCAAATGAA
GACTAA

Translation (771 aa):
MFSLKPPRPSFRSYLLPPAQTDDKISSEPKIKKLEPVLLPGEIVVNEVNFVRKCIATDTSQYDLWGKLIC
SNFKISFITDDPMPLQKFHYRNLLLGEHDVPLTCIEQIVTVNDHKRKQKVLGPNQKLKFNPTELIIYCKD
FRIVRFRFDESGPESAKKVCLAIAHYSQPTDLQLLFAFEYVGKKYHNSANKVNGVSSGGGGVWSGAGSTG
SQRTPLFETYSDWDRETKRTGASGWRVCSINEGYMISTCLPEYFVVPSSLADQDLKIFSHSFVGRRMPFW
CWSHSNGSALVRMALIKDALQQRKIDQRICNAITKSHPQRSDVYKSDLDKALPNIQEIQAAFVKLKQLCV
NEPFEETEEKWLSSLESTRWLEYVRAFLKHSAELVYILESQRLSVVLQEEEGRDLSCLVASLIQVMMDPY
FRTITGFQSLIQKEWVMAGYQFLDRCNHLKRSEKESPLFLLFLDTTWQLLEQYPAAFEFSETYLAVLCDS
TRISLFGTFLFNSPHQRVKQSTEFAISKNIQLGDEKGLKFPSVWDWALQFTAKDRTLFHNPFYIGKSTPC
VQNGSRKSFKRTKKSYSSTLRGMPSCLKNGIITDQDLLPRRNSLVLKLKPDPPQHTDSQHSGAEQYFKEW
FSRPANLHGIILPRLSGTHIKLWKLCYFRWVPEAQINLGGSIMAFHKLSLLADEVDMLSRMLRQHRSGPL
EACYAELDQSRMYFRATGPHDTLGTPEFLSSSFPFSPVGNLCRRSILGTPLSKFLSGAKIWLSTETLANE
D


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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