NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS38876.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38876.1 Public Mus musculus 4 Inpp5b 23 108 98 CCDS HistoryNCBI Gene:16330Re-query CCDS DB by CCDS ID:38876.1Re-query CCDS DB by GeneID:16330See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38876.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094782.9 ENSMUSP00000092375.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094782.9Link to Ensembl Protein Viewer:ENSMUSP00000092375.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000094782Re-query CCDS DB by Protein ID:ENSMUSP00000092375
Original member Current member NCBI NM_008385.4 NP_032411.3 Accepted alive Link to Nucleotide Sequence:NM_008385.4Link to Protein Sequence:NP_032411.3Re-query CCDS DB by Nucleotide ID:NM_008385Re-query CCDS DB by Protein ID:NP_032411Link to BLAST:NP_032411.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032411.3 993 Q8K337-1 993 100% 0 0

Chromosomal Locations for CCDS 38876.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 124742534 124742590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124742936 124743030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124743636 124743733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124743874 124743903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124746072 124746182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124751312 124751692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124777341 124777437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124780371 124780538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124782390 124782491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124783888 124784002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124784311 124784427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124785173 124785360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124786518 124786629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124787472 124787581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124789069 124789204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124791506 124791616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124792193 124792355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124793174 124793409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124795356 124795469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124797825 124797909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124798252 124798379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124799768 124799879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124800706 124800821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2982 nt):
ATGGACCAGTCTGTGGCAATCCAGGAGACCCTGGTTGAGGGGGAATACTGCGTCATCGCAGTCCAAGGTG
TGCTGTGTAAGGGAGATAGCCGGCAGAGCCGCCTGCTCGGGCTGGTGAGGTACCGGCTGGAAAATGACGC
CCAGGAGCATGCTCTCTTCCTGTATACACACCGGAGGATGGCCATCACAGGAGACGATGTATCTCTGGAC
CAGATAGTGCCACTCTCAAAAGATTTTATGCTGGAAGAAGTGTCCCCAGATGGTGAACTCTACATCCTTG
GCTCTGATGTGACAGTACAATTGAACACAGCTGAACTCAAGCTTGTATTCCAACTTCCCTTTGGTTCACA
CACCAGAACGTTCCTCCAGGAAGTGGCCAGAGCCTGTCCAGGTTTCGACCCTGAGACGCGGGATCCCGAG
TTCGAGTGGCTGTCAAGACACACATGCGCGGAGCCCGATGCCGAGTCGCCGAAACCGCGCGAGTGGAATT
CGGACCCGGGTACCCGGAGTGGGTTCGCGCCCATTGGAGGAAGCAGGCATCAGTCTCGGAATGCACGGCG
AGGATTGGAGGATGTCTTGCCTAGGGGCCCTGGCTACATTCTGCTTTGGGGCGGAGCCGCTGAGGAGCCG
GAATTTCTATTGGCGGAGGAGATGCATGAGGGCGGGCCTGTGAGAGGACGGAGACCGCTCGCCGGGCGGC
GGGATGAAGCGCTTGAGGAAGCAGACTGGGAAATGTCGGCAGGCGGCGGCTCTCGGGAGCGCGACTGTGC
AGGCGTTTCTAATGTGGACAGCTCGAGGCCAAATGGGAGGGGCCCGGACCAACCCTCCGGAGCCAGGTGT
CCGGAGAAACCAGAAAACTCTCTCACAAGACAGAATAAATCTAAGTCTGACATGTCTGAAAAGGTTCGCT
CCGCCACAGTCACAGTATCGGACAAGGCTCACATTTTATCCGTGCAGAAGTTTGGGCTTCGAGACACAAT
CGTGAGATCACACCTCGTGCAGAAGGAAGAGAATTATACCTACATCCAGAACTTCAGGTTTTTTGTGGGA
ACCTACAATGTGAACGGACAGTCCCCCAAAGAATGTCTCCGGCCCTGGCTGAGCCACAGCGCCCTGGCCC
CCGACGTGTACTGTGTAGGGTTCCAGGAGCTCGACCTGAGTAAGGAAGCCTTCTTCTTTCACGATACCCC
AAAGGAGGAAGAGTGGTTTAAGGCCGTGTCAGAAAGCCTTCACCCAGACGCCAAGTACGCAAAGGTGAAG
TTCGTCCGACTGGTTGGGATTATGTTGCTGCTGTACGTCAAACAGGAACATGCAGCCTATATCTCAGAAG
TGGAAGCTGAGACCGTAGGGACAGGAATCATGGGAAGGATGGGTAACAAAGGAGGAGTGGCGATCAGGTT
CCAGCTGCACAACACCAGCATCTGCGTTGTCAATTCCCATCTGGCAGCCCACACAGAGGAGTACGAGAGG
AGGAACCAAGACTACAGAGACATTTGTTCTCGAATGCAGTTCCCTCAGGTGGATCCGAGCCAACCCCCTC
TCACCATTAACAAGCATGATGTGATCTTGTGGCTGGGAGACCTCAACTACAGGATAGAAGAGCTGGATGT
GGGAAAGGTGAAAAAGCTCGTGGAAGAGAAGGCCTTCCAAACCCTGTATGCGCACGACCAGCTAAAAATC
CAGGTGGCTGCCAGGACCATCTTTGATGGCTTCACCGAGGGTGAGATTACATTCCAGCCTACTTACAAGT
ACGATACTGGCTCTGACGACTGGGACACCAGTGAGAAGTGTCGTGCACCGGCCTGGTGTGACCGAATCCT
GTGGAAAGGAAAGAACATCACTCAGCTGAGTTACCAGAGCCACATGGCCTTGAAGACCAGTGACCACAAG
CCTGTCAGCTCAGTGTTTGACATTGGGGTGAGGGTTGTCAATGAAGAACTCTACCGGAAGACCCTGGAGG
AAATTGTCCGCTCCCTGGATAAAATGGAAAACGCCAACATTCCTTCTGTGACCCTCTCCAAGCGGGAGTT
CTGTTTTGAGAATGTGAAGTACATGCAGTTGCAAACCGAGTCCTTCACGATTCATAATAGCCAAGTGCCC
TGTCAGTTTGAATTCATCAACAAGCCTGACGAAGAGTCCTACTGTAAGCAGTGGCTGACGGCCAGACCCA
GCAAGGGCTTCCTCCTGCCAGATTCGCATGTTGAGATTGAACTTGAGCTTTTTGTAAATAAGTCTACTGC
CACAAAACTCAACTCAGGCAAGGACACGATTGAAGACATTCTGGTTTTACACTTGGAGCGGGGAAAGGAC
TACTTTCTGTCTGTGTCTGGGAACTACCTGCCCAGCTGCTTCGGATCTCCTATCCATACATTGTGCTACA
TGAGGGAGCCCATCTTGGATCTACCACTGAAAACTGTTAGTGACCTGACGTTGATGTCAGTGCAGACTGC
AGATGACAGGAGCCAGTTGGAGAACCCCATGGAAATCCCCAAAGAGCTCTGGATGATGGTGGATTACCTG
TACAGAAATGCCGTCCAGCAGGAAGATCTGTTTCAGCAGCCAGGTCTGAGGCCAGAGTTTGACCATATAA
GGGACTGTCTAGATACTGGGATGATCGACCAGCTCTGTGCTAACAACCATTCTGTAGCCGAAGCCTTGCT
GCTTTTCCTAGAGAGCCTGCCAGAGCCTGTCATCTGTTACAGCGCCTACCATAGCTGCTTGGAGTGTTCT
GGCAATTACGCAGCAAGCAAGCAGATAATTTTAACCCTCCCCAGCTTCCACAAAAATGTCTTCAACTACT
TGATGGCGTTTTTGCAAGAACTGCTGAAAAATTCAGCAAACAATCATTTGGATGAGAATATTCTAGCTAG
CATATTTGGCAGCTTACTGCTCCGGAACCCAGCTCGTCACCAAAAGCTTGACATGGCGGAAAAGAAGAAG
GCCCAAGAGTTTATTCACCAGTTCCTCTGCGGTCCACTCTGA

Translation (993 aa):
MDQSVAIQETLVEGEYCVIAVQGVLCKGDSRQSRLLGLVRYRLENDAQEHALFLYTHRRMAITGDDVSLD
QIVPLSKDFMLEEVSPDGELYILGSDVTVQLNTAELKLVFQLPFGSHTRTFLQEVARACPGFDPETRDPE
FEWLSRHTCAEPDAESPKPREWNSDPGTRSGFAPIGGSRHQSRNARRGLEDVLPRGPGYILLWGGAAEEP
EFLLAEEMHEGGPVRGRRPLAGRRDEALEEADWEMSAGGGSRERDCAGVSNVDSSRPNGRGPDQPSGARC
PEKPENSLTRQNKSKSDMSEKVRSATVTVSDKAHILSVQKFGLRDTIVRSHLVQKEENYTYIQNFRFFVG
TYNVNGQSPKECLRPWLSHSALAPDVYCVGFQELDLSKEAFFFHDTPKEEEWFKAVSESLHPDAKYAKVK
FVRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRMGNKGGVAIRFQLHNTSICVVNSHLAAHTEEYER
RNQDYRDICSRMQFPQVDPSQPPLTINKHDVILWLGDLNYRIEELDVGKVKKLVEEKAFQTLYAHDQLKI
QVAARTIFDGFTEGEITFQPTYKYDTGSDDWDTSEKCRAPAWCDRILWKGKNITQLSYQSHMALKTSDHK
PVSSVFDIGVRVVNEELYRKTLEEIVRSLDKMENANIPSVTLSKREFCFENVKYMQLQTESFTIHNSQVP
CQFEFINKPDEESYCKQWLTARPSKGFLLPDSHVEIELELFVNKSTATKLNSGKDTIEDILVLHLERGKD
YFLSVSGNYLPSCFGSPIHTLCYMREPILDLPLKTVSDLTLMSVQTADDRSQLENPMEIPKELWMMVDYL
YRNAVQQEDLFQQPGLRPEFDHIRDCLDTGMIDQLCANNHSVAEALLLFLESLPEPVICYSAYHSCLECS
GNYAASKQIILTLPSFHKNVFNYLMAFLQELLKNSANNHLDENILASIFGSLLLRNPARHQKLDMAEKKK
AQEFIHQFLCGPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH