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Report for CCDS3884.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3884.1 Public Homo sapiens 5 OTULINL 24 110 108 CCDS HistoryNCBI Gene:54491Re-query CCDS DB by CCDS ID:3884.1Re-query CCDS DB by GeneID:54491See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3884.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000274217.4 ENSP00000274217.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000274217.4Link to Ensembl Protein Viewer:ENSP00000274217.3Re-query CCDS DB by Nucleotide ID:ENST00000274217Re-query CCDS DB by Protein ID:ENSP00000274217
Original member Current member NCBI NM_019018.3 NP_061891.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019018.3Link to Protein Sequence:NP_061891.1Re-query CCDS DB by Nucleotide ID:NM_019018Re-query CCDS DB by Protein ID:NP_061891Link to BLAST:NP_061891.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061891.1 356 Q9NUU6 356 100% 0 0

Chromosomal Locations for CCDS 3884.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 14581895 14581958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 14600965 14601124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 14601213 14601244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 14601351 14601442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 14602183 14602332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 14607330 14607458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 14608748 14609017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 14610141 14610314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1071 nt):
ATGGCGGCGACAAGGAGCCCCACGCGGGCAAGGGAGCGGGAGCGGTCTGGCGCTCCCGCCGCAGGAAGTG
ACCAAGTTCACTCCTGGATGCTAGCTACAAGCCAAGCCTTAGACACTGTCTGGAGAATGGCAAAAGGCTT
TGTGATGTTGGCAGTTTCATTTCTGGTGGCTGCCATCTGCTACTTCCGGAGGCTACATTTATATTCAGGG
CACAAGCTGAAATGGTGGATTGGATATCTGCAGAGAAAATTCAAAAGGAACCTCAGTGTGGAGGCAGAGG
TTGATTTACTCAGTTATTGTGCAAGAGAATGGAAAGGAGAGACACCCCGTAACAAGCTGATGAGGAAGGC
TTATGAGGAGCTATTTTGGCGGCATCACATTAAATGTGTTCGACAAGTAAGGAGAGATAACTATGATGCT
CTCAGATCAGTGTTATTTCAGATATTCAGCCAGGGCATCTCTTTTCCATCATGGATGAAAGAAAAGGACA
TTGTTAAGCTTCCTGAAAAACTGCTGTTTTCACAAGGTTGTAATTGGATTCAGCAGTACAGTTTTGGTCC
TGAGAAGTATACAGGCTCGAATGTGTTTGGAAAACTACGGAAATATGTGGAATTATTGAAAACACAGTGG
ACTGAATTTAATGGCATTAGAGATTATCACAAGAGAGGAAGTATGTGCAACACCCTTTTTTCAGATGCCA
TTCTGGAATATAAACTTTATGAAGCTTTAAAGTTCATCATGCTGTATCAAGTCACTGAAGTTTATGAACA
AATGAAGACTAAAAAGGTCATTCCCAGTCTTTTTAGACTCCTGTTTTCCAGGGAGACATCCTCTGATCCT
TTGAGCTTCATGATGAATCACCTGAATTCTGTAGGCGACACATGTGGACTAGAGCAGATTGATATGTTTA
TACTTGGATACTCCCTTGAAGTAAAGATAAAAGTGTTCAGACTGTTCAAGTTTAACTCCAGAGACTTTGA
AGTCTGCTACCCAGAGGAGCCTCTCAGGGACTGGCCGGAGATCTCCCTGCTGACCGAGAACGACCGCCAC
TACCACATTCCAGTCTTTTAA

Translation (356 aa):
MAATRSPTRARERERSGAPAAGSDQVHSWMLATSQALDTVWRMAKGFVMLAVSFLVAAICYFRRLHLYSG
HKLKWWIGYLQRKFKRNLSVEAEVDLLSYCAREWKGETPRNKLMRKAYEELFWRHHIKCVRQVRRDNYDA
LRSVLFQIFSQGISFPSWMKEKDIVKLPEKLLFSQGCNWIQQYSFGPEKYTGSNVFGKLRKYVELLKTQW
TEFNGIRDYHKRGSMCNTLFSDAILEYKLYEALKFIMLYQVTEVYEQMKTKKVIPSLFRLLFSRETSSDP
LSFMMNHLNSVGDTCGLEQIDMFILGYSLEVKIKVFRLFKFNSRDFEVCYPEEPLRDWPEISLLTENDRH
YHIPVF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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