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Report for CCDS38436.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38436.1 Public Mus musculus 3 Serp1 23 108 98 CCDS HistoryNCBI Gene:28146Re-query CCDS DB by CCDS ID:38436.1Re-query CCDS DB by GeneID:28146See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38436.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000029385.8 ENSMUSP00000029385.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000029385.8Link to Ensembl Protein Viewer:ENSMUSP00000029385.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000029385Re-query CCDS DB by Protein ID:ENSMUSP00000029385
Original member Current member NCBI NM_030685.3 NP_109610.1 Accepted alive Link to Nucleotide Sequence:NM_030685.3Link to Protein Sequence:NP_109610.1Re-query CCDS DB by Nucleotide ID:NM_030685Re-query CCDS DB by Protein ID:NP_109610Link to BLAST:NP_109610.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_109610.1 66 Q9Z1W5 66 100% 0 0

Chromosomal Locations for CCDS 38436.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 58523828 58523868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 58525083 58525158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 58525410 58525493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (201 nt):
ATGGTCGCCAAGCAGAGGATCCGTATGGCCAACGAGAAGCACAGCAAGAACATAACTCAGCGCGGCAACG
TCGCTAAGACCTCGAGAAATGCCCCCGAAGAAAAGGCGTCGGTAGGACCCTGGTTATTGGCCCTCTTCAT
TTTTGTTGTCTGTGGCTCTGCAATTTTCCAGATTATTCAAAGTATCAGGATGGGCATGTGA

Translation (66 aa):
MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMGM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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