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Report for CCDS375.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
375.1 Public Homo sapiens 1 AZIN2 24 110 108 CCDS HistoryNCBI Gene:113451Re-query CCDS DB by CCDS ID:375.1Re-query CCDS DB by GeneID:113451See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 375.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000294517.11 ENSP00000294517.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000294517.11Link to Ensembl Protein Viewer:ENSP00000294517.6Re-query CCDS DB by Nucleotide ID:ENST00000294517Re-query CCDS DB by Protein ID:ENSP00000294517
Original member Current member EBI ENST00000373443.7 ENSP00000362542.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373443.7Link to Ensembl Protein Viewer:ENSP00000362542.3Re-query CCDS DB by Nucleotide ID:ENST00000373443Re-query CCDS DB by Protein ID:ENSP00000362542
Original member Current member NCBI NM_001293562.2 NP_001280491.1 Accepted alive Link to Nucleotide Sequence:NM_001293562.2Link to Protein Sequence:NP_001280491.1Re-query CCDS DB by Nucleotide ID:NM_001293562Re-query CCDS DB by Protein ID:NP_001280491Link to BLAST:NP_001280491.1
Original member Current member NCBI NM_001376722.1 NP_001363651.1 Accepted alive Link to Nucleotide Sequence:NM_001376722.1Link to Protein Sequence:NP_001363651.1Re-query CCDS DB by Nucleotide ID:NM_001376722Re-query CCDS DB by Protein ID:NP_001363651Link to BLAST:NP_001363651.1
Original member Current member NCBI NM_001376724.1 NP_001363653.1 Accepted alive Link to Nucleotide Sequence:NM_001376724.1Link to Protein Sequence:NP_001363653.1Re-query CCDS DB by Nucleotide ID:NM_001376724Re-query CCDS DB by Protein ID:NP_001363653Link to BLAST:NP_001363653.1
Original member Current member NCBI NM_052998.4 NP_443724.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052998.4Link to Protein Sequence:NP_443724.1Re-query CCDS DB by Nucleotide ID:NM_052998Re-query CCDS DB by Protein ID:NP_443724Link to BLAST:NP_443724.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001280491.1 460 Q96A70-1 460 100% 0 0
NP_001363651.1 460 Q96A70-1 460 100% 0 0
NP_001363653.1 460 Q96A70-1 460 100% 0 0
NP_443724.1 460 Q96A70-1 460 100% 0 0

Chromosomal Locations for CCDS 375.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 33082250 33082354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33083954 33084127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33092050 33092222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33093282 33093416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33094548 33094713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33096707 33096869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33098067 33098179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33117902 33118116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33120044 33120182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1383 nt):
ATGGCTGGCTACCTGAGTGAATCGGACTTTGTGATGGTGGAGGAGGGCTTCAGTACCCGAGACCTGCTGA
AGGAACTCACTCTGGGGGCCTCACAGGCCACCACGGACGAGGTAGCTGCCTTCTTCGTGGCTGACCTGGG
TGCCATAGTGAGGAAGCACTTTTGCTTTCTGAAGTGCCTGCCACGAGTCCGGCCCTTTTATGCTGTCAAG
TGCAACAGCAGCCCAGGTGTGCTGAAGGTTCTGGCCCAGCTGGGGCTGGGCTTTAGCTGTGCCAACAAGG
CAGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGCCAACCCCTGTAAGCA
AATTGCACAGATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGACAATGAGATGGAGCTG
GCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGATGGTTCTGTGCATTGCTACCGATGACTCCCACTCCC
TGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAGACACCTGCTTGAAAATGCGAAGAA
GCACCATGTGGAGGTGGTGGGTGTGAGTTTTCACATTGGCAGTGGCTGTCCTGACCCTCAGGCCTATGCT
CAGTCCATCGCAGACGCCCGGCTCGTGTTTGAAATGGGCACCGAGCTGGGTCACAAGATGCACGTTCTGG
ACCTTGGTGGTGGCTTCCCTGGCACAGAAGGGGCCAAAGTGAGATTTGAAGAGATTGCTTCCGTGATCAA
CTCAGCCTTGGACCTGTACTTCCCAGAGGGCTGTGGCGTGGACATCTTTGCTGAGCTGGGGCGCTACTAC
GTGACCTCGGCCTTCACTGTGGCAGTCAGCATCATTGCCAAGAAGGAGGTTCTGCTAGACCAGCCTGGCA
GGGAGGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCGTGTATGGGATCTT
CAACTCAGTCCTGTTTGACAACATCTGCCCTACCCCCATCCTGCAGAAGAAACCATCCACGGAGCAGCCC
CTGTACAGCAGCAGCCTGTGGGGCCCGGCGGTTGATGGCTGTGATTGCGTGGCTGAGGGCCTGTGGCTGC
CGCAACTACACGTAGGGGACTGGCTGGTCTTTGACAACATGGGCGCCTACACTGTGGGCATGGGTTCCCC
CTTTTGGGGGACCCAGGCCTGCCACATCACCTATGCCATGTCCCGGGTGGCCTGGGAAGCGCTGCGAAGG
CAGCTGATGGCTGCAGAACAGGAGGATGACGTGGAGGGTGTGTGCAAGCCTCTGTCCTGCGGCTGGGAGA
TCACAGACACCCTGTGCGTGGGCCCTGTCTTCACCCCAGCGAGCATCATGTGA

Translation (460 aa):
MAGYLSESDFVMVEEGFSTRDLLKELTLGASQATTDEVAAFFVADLGAIVRKHFCFLKCLPRVRPFYAVK
CNSSPGVLKVLAQLGLGFSCANKAEMELVQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMEL
AKVVKSHPSAKMVLCIATDDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYA
QSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGRYY
VTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPTPILQKKPSTEQP
LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGSPFWGTQACHITYAMSRVAWEALRR
QLMAAEQEDDVEGVCKPLSCGWEITDTLCVGPVFTPASIM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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