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Report for CCDS37269.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37269.1 Public Mus musculus 16 2610318N02Rik 23 108 98 CCDS HistoryNCBI Gene:70458Re-query CCDS DB by CCDS ID:37269.1Re-query CCDS DB by GeneID:70458See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37269.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000093336.7 ENSMUSP00000091026.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000093336.7Link to Ensembl Protein Viewer:ENSMUSP00000091026.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000093336Re-query CCDS DB by Protein ID:ENSMUSP00000091026
Original member Current member EBI ENSMUST00000231681.1 ENSMUSP00000156313.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000231681.1Link to Ensembl Protein Viewer:ENSMUSP00000156313.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000231681Re-query CCDS DB by Protein ID:ENSMUSP00000156313
Original member Current member NCBI NM_001358255.1 NP_001345184.1 Accepted alive Link to Nucleotide Sequence:NM_001358255.1Link to Protein Sequence:NP_001345184.1Re-query CCDS DB by Nucleotide ID:NM_001358255Re-query CCDS DB by Protein ID:NP_001345184Link to BLAST:NP_001345184.1
Original member Current member NCBI NM_183287.3 NP_899110.2 Accepted alive Link to Nucleotide Sequence:NM_183287.3Link to Protein Sequence:NP_899110.2Re-query CCDS DB by Nucleotide ID:NM_183287Re-query CCDS DB by Protein ID:NP_899110Link to BLAST:NP_899110.2

Chromosomal Locations for CCDS 37269.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 17113452 17113626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 17117480 17117584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 17117794 17117864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 17118292 17118512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 17120956 17121079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 17121296 17121517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGGAAGTCCTGGATGAGTTCGACAACGAATTCCCCCTGAGTGTGACCTTCTGCCAGCTCATTTCCGAGG
ATGACTTCGAGAGGCAAGCAGCGACCTACACAGAGCGTGCACTGCGACGACTCTTCCGCACCTTGGATCG
CAACCCAGCACTGGCGGAGAGAGTCGTGCGGAAGGGCAAGCAGACTGAGTTCGAGCAGCGCGGGCTCCTC
TGCAGCCTCTGGGCGAAGTTTGTCTGCGCTGTGCAGGGGGATCTAAACCAGTGCAATGACATGGGTGCCA
TAGAGATGCATCGGCGCCTGGAGCAGCTGAAGAGGCGCATACATCGTGTGCATCTGTATTCCCAGGATGC
CAAGAAGAGGAGGAGGAGGCCAAAACCAAAGAAACCAGATCCTATCTTTCGAGATCAGTCAACCTCCGCA
TGCCTGCCACCAGCTCTCTTACCACCACCGCTGCTGCCGCCACCACCACAACCTGTCACCACCGTGGCCT
CTGTAGTGGCTGCATCACCCTCTGTCTACACTATGCCCCGGGTCTTTGGCCCTTTCCCTCCACTGTCTGG
CAAGCCGATGGAGAAACTGGATATTTCAAGTTCTGAAGTGAAACTAAACTGGAGTGGTCTTTCATCAACG
TCAAAGAGCCACATGGTTGATCTGACCCCCTTGGTTCTCAATCCCGGAGGCTTCCATTTCTCATATTTGG
CAGGAAGCAGTGCACACAAGCTCCATTGTCCTGGCTTTCCCTGGACGCCAGCCTGTAGCCGACCCTCCAA
CACGGATGAGACGCCATCTCCTGTTGTGAAAACCTCCATCTTCACTCCGCCTGTACTGCTCAAGTTCCAA
CCTGTGCCCAGACCCAATGATGATTCAGAGAATGACTCTGGCAGCGCAGAGTCCACTCCTGCCAAGGAGA
GCCAGTAA

Translation (305 aa):
MEVLDEFDNEFPLSVTFCQLISEDDFERQAATYTERALRRLFRTLDRNPALAERVVRKGKQTEFEQRGLL
CSLWAKFVCAVQGDLNQCNDMGAIEMHRRLEQLKRRIHRVHLYSQDAKKRRRRPKPKKPDPIFRDQSTSA
CLPPALLPPPLLPPPPQPVTTVASVVAASPSVYTMPRVFGPFPPLSGKPMEKLDISSSEVKLNWSGLSST
SKSHMVDLTPLVLNPGGFHFSYLAGSSAHKLHCPGFPWTPACSRPSNTDETPSPVVKTSIFTPPVLLKFQ
PVPRPNDDSENDSGSAESTPAKESQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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