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Report for CCDS37010.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37010.1 Public Mus musculus 14 Cldn10 23 108 98 CCDS HistoryNCBI Gene:58187Re-query CCDS DB by CCDS ID:37010.1Re-query CCDS DB by GeneID:58187See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37010.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100314.3 ENSMUSP00000097889.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100314.3Link to Ensembl Protein Viewer:ENSMUSP00000097889.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000100314Re-query CCDS DB by Protein ID:ENSMUSP00000097889
Original member Current member NCBI NM_021386.4 NP_067361.2 Accepted alive Link to Nucleotide Sequence:NM_021386.4Link to Protein Sequence:NP_067361.2Re-query CCDS DB by Nucleotide ID:NM_021386Re-query CCDS DB by Protein ID:NP_067361Link to BLAST:NP_067361.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067361.2 231 Q9Z0S6-1 231 100% 0 0

Chromosomal Locations for CCDS 37010.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 118854990 118855209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118861696 118861857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118861949 118862030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118873601 118873708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118874192 118874315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (696 nt):
ATGGCTAGCACGGCCTTGGAAATCGTCGCCTTCGTAGTCTCCATCTCGGGCTGGGTGCTAGTGTCTTCCA
CACTGCCCACCGACTACTGGAAGGTCTCCACCATCGATGGCACTGTCATCACCACAGCCACTTATTTTGC
CAACCTGTGGAAGATCTGCGTTACCGATTCCACCGGTGTCGCCAACTGCAAGGAGTTCCCCTCCATGCTG
GCGTTGGATGGTTACATCCAGGCATGTAGAGGACTAATGATCGCTGCGGTCAGCCTGGGATTTTTCGGTT
CCATTTTTGCACTCTTTGGAATGAAATGTACCAAAGTCGGAGGCTCAGATCAAGCCAAAGCTAAAATTGC
TTGCTTGGCCGGGATTGTATTCATATTGTCAGGTCTGTGTTCCATGACAGGCTGTTCCCTGTATGCAAAC
AAAATCACAACAGAATTCTTTGATCCTCTTTATATGGAGCAAAAGTATGAATTAGGGGCTGCTCTCTTCA
TCGGATGGGCAGGAGCTTCTCTCTGCATCATTGGGGGAGTCATATTTTGCTTTTCAATATCCGACAACAA
CAAGACACCCAGAATGGGCTACACATACAACGGACCCACGTCTGCCATGTCTTCTCGGACCAAGTATCAA
GGCGGAGAAGGAGATTTTAAAACCACAGGCCCTTCAAAACAGTTTGATAAAAATGCCTATGTCTAA

Translation (231 aa):
MASTALEIVAFVVSISGWVLVSSTLPTDYWKVSTIDGTVITTATYFANLWKICVTDSTGVANCKEFPSML
ALDGYIQACRGLMIAAVSLGFFGSIFALFGMKCTKVGGSDQAKAKIACLAGIVFILSGLCSMTGCSLYAN
KITTEFFDPLYMEQKYELGAALFIGWAGASLCIIGGVIFCFSISDNNKTPRMGYTYNGPTSAMSSRTKYQ
GGEGDFKTTGPSKQFDKNAYV


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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