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Report for CCDS36890.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36890.1 Public Mus musculus 14 4930503E14Rik 23 108 98 CCDS HistoryNCBI Gene:74954Re-query CCDS DB by CCDS ID:36890.1Re-query CCDS DB by GeneID:74954See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36890.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100688.2 ENSMUSP00000098254.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100688.2Link to Ensembl Protein Viewer:ENSMUSP00000098254.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000100688Re-query CCDS DB by Protein ID:ENSMUSP00000098254
Original member Current member NCBI NM_029131.3 NP_083407.1 Accepted alive Link to Nucleotide Sequence:NM_029131.3Link to Protein Sequence:NP_083407.1Re-query CCDS DB by Nucleotide ID:NM_029131Re-query CCDS DB by Protein ID:NP_083407Link to BLAST:NP_083407.1

Chromosomal Locations for CCDS 36890.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 44163854 44163962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 44169166 44169297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 44170282 44170444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 44171174 44171303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (534 nt):
ATGTTTTCCTGGCTGCGCAGGCTATTTCACAGGGAGAATGGCGATCAAGGAGAGACAAGACCAAGGCAGA
AGGAATCTGCCATCCCTTCTTGTAAAAACAGAAGAATGAAATCATTCTGGGAAAGGCACATGTCTGCTGG
GAAAACATCATCCCAAAATTGCAACATCACTAATCATATGAAGAATATGAATAAACTAGATGATATGAAA
TTTTATATCAGAAAGATAAATGCTGAGAGGTTAGAACTTTTTCGAATCTTGGACATTGACATGAATACTG
ATTTGAACTACAGGATGAACATTGAATTCACCATCATCAAATCACAACATGAGAAGACAATGTTGGATAT
GGAAAAAATGACGCAGTCAATAAGTGATACCATTGAGAAGTACAAGGAATTCATAGAAGATAAGGATTCC
TACAGGTGTGAAATACTCCAGCAGAAACTGGAACATGGAACAGACCAGGACAAGGTCTCCTTCGAAGAGA
ACATCTGCGTGTGCGAAGCAAATATTTCATCTCATCCCCAGTAA

Translation (177 aa):
MFSWLRRLFHRENGDQGETRPRQKESAIPSCKNRRMKSFWERHMSAGKTSSQNCNITNHMKNMNKLDDMK
FYIRKINAERLELFRILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKMTQSISDTIEKYKEFIEDKDS
YRCEILQQKLEHGTDQDKVSFEENICVCEANISSHPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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