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Report for CCDS36573.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
36573.1 |
Public |
Mus musculus |
12 |
Pacs2 |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Provisional (this record has not been manually reviewed by the collaboration)
Attributes |
Inferred exon combination |
Sequence IDs included in CCDS 36573.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000084891.4 |
ENSMUSP00000081953.4 |
Accepted |
alive |
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NCBI |
NM_001081170.1 |
NP_001074639.1 |
Accepted |
alive |
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Chromosomal Locations for CCDS 36573.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2679 nt): ATGGCCGAGCGGGGCCGCCTCGGCCTGCCCGGCGCGCCCGGAGCGCTCAACACTCCGGTGCCCATGAACC TGTTTGCCACCTGGGAGGTGGACGGCTCCAGCCCCAGCTGCGTGCCCAGGTTGTGTAGCCTGACCCTGAA GAAGCTGGCAGTGCTCCGGGAACTGGAAAAAGAACTCCTGTCCGTGGTGATTGCCGTCAAGATGCAGGGT TCCAAGCGTGTCTTGAGATCACATGAGATTGTGTTGCCTCCTAGTGGACAAGTGGAAACTGACCTGGCTC TGACCTTCTCTCTCCAGTACCCCCACTTCCTGAAGCGGGAAGGCAACAAGCTGCAGATCATGCTACAGCG CAGGAAGCGGTACAAGAACAGGACGATCCTGGGCTACAAAACGCTGGCCGCGGGCTCCATCAACATGGCT GAGGTGATGCAGCACCCCTCTGAGGGCGGCCAAGTTCTGAGCCTCTGCAGCAGCATCAAAGAGGCCTCTG TCAAGGTGGCCGAGATCTGGATCGTCTCCCTGTCCAGCCAGCCCATCGACCATGAGGATAGTGCCATGCA GGCTGGCCCCAAGACCAAGTCCACAGATAACTACTCTGAGGAGGAGTATGAGAGCTTTTCCTCTGAACAA GAAGCCAGTGACGATGCTGTACAAGGGCAGGATCTTGACGAGGACGACTTTGATGTGGGAAAACCCAAGA AGCAGCGGCGCTCGATAGTAAGAACGACGTCCATGACCAGGCAACAGAACTTCAAGCAGAAGGTGGTGGC GCTACTGCGCAGGTTCAAGGTGTCAGAGGAGGTCTTGGATTCGGAGCAGGACCCTGCAGAACATGTTCCC GAGGTGGAGGAGGACCTGGATCTTCTCTATGACACGCTGGATGTGGAGAACCCCAGCGACAGTGGCCCTG ACATGGATGACGATGACAGTGTCCTTAGCACCCCCAAGCCCAAGCTCAGGCCTTACTTCGAAGGCCTGTC TCACTCCAGCTCACAGACAGAGATAGGGAGCATCCACAGTGCCCGGAGCCACAGGGAGCCTCCAAGCCCG GCTGATGTACCTGAGAAGACGCGATCCCTGGGAGGCAAGCAGCAGCTCAGCGACAGCGTCTCTGACACGG TGGCCCTTAGTGCAGCAGTCCCCCGGGAACCATCAGGGCAACCTGAGGACAGCCCAGAGGCTGAGACCTC CACCTTAGATGTGTTCACCGAGAAGCTGCCTCCCAGTGGAAGAATCATCAAGACTGAGTCACTTGTCATC CCCTCCACCAGGTCAGAATCAAAGCCGGCCGGCCGCCGGGGCCGGAGCACATCCCTGAAGGAGCGACAGC CTGCTCGGCCACAGAATGAACGGGCCAACAGCCTAGACAATGAGCGCTGTCCAGACACGAGGAGCCAGCT TCAGATTCCCAGGAAAACTGTGTATGACCAATTGAACCACATCCTCATCTCTGATGACCAACTCCCCGAG AATATCATTCTCGTCAACACCTCTGACTGGCAGGGACAGTTCCTCTCAGATGTCCTGCAGAAGCATACAC TTCCTGTGGTCTGCACGTGCTCTGCTGCTGACGTGCAGGCTGCCTTCAGCACCATTGTCTCTCGGATACA GCGATACTGCAACTGCAATTCTCAGCCACCGACCCCTGTGAAGATCGCAGTGGCGGGAGCGCAGCATTAC CTCAGCGCCATCCTGCGGCTCTTCGTGGAGCAGCTGTCTCACAAGACACCTGACTGGCTCGGCTACATGC GCTTCCTCATCATCCCACTGGGCTCCCACCCCGTGGCCAGGTACCTGGGCTCTGTGGACTACCGCTACAA CAACTTCTTCCAGGATCTGGCCTGGAGAGACCTGTTCAACAAGCTGGAAGCCCAGAGCAGTGTGCAGGAC ACACCAGACATCGTGTCACGCATCACCCAGTACATCTCAGGAGCCAACTGTGCTCACCAGCTCCCCATCG CAGAGGCCATGCTGACCTACAAGCAGAAGAGCCCTGATGAAGAATCCTCTCAGAGGTTCATTCCCTTTGT CGGGGTTGTGAAGGTTGGAATCGTGGAACCATCTTCAGCCACATCAGGAGACTCTGACGACGCAGCCCCC TCAAGCTCCAGCATACTCTCTTCTACCCCACCGTCTGCATCTACATCTCCGGCGGCCAAGGAGGCTTCGC CTACCCCACCCTCCTCCCCTTCAGTGAGTGGAGGCCTGTCCTCCCCCAGCCAGGGCGTCGGTGCTGAGCT CATGGGGCTGCAGGTGGACTACTGGACAGCAGCGCAGCCTGCGGACAGGAAGAGAGATGCCGAGAAGAAG GACATGCCCACCACCAAAAACACGCTCAAGTGCACTTTCCGGTCCCTCCAGGTCAGCAGGCTGCCCAGCA GTGGTGAGGCTGCAGCCACACCCACCATGTCCATGACTGTCGTCACCAAGGAGAAGAACAAGAAGGTGAT GTTTTTGCCCAAGAAAACAAAGGACAAGGAAGTGGAATCCAAAAGCCAGTGCATCGAGGGCATCAGCCGG CTGATCTGCACAGCTAAGCACCAACAGAACATGCTTCGGGTCCTCATCGACGGCGTGGAATGCAGCGATG TCAAGTTCTTCCAGCTGGCTGCCCAGTGGTCTTCTCACGTGAAGCACTTCCCCATCTGCATCTTTGGACA CTCCAAAGCCACCTTCTAG
Translation (892 aa): MAERGRLGLPGAPGALNTPVPMNLFATWEVDGSSPSCVPRLCSLTLKKLAVLRELEKELLSVVIAVKMQG SKRVLRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKRYKNRTILGYKTLAAGSINMA EVMQHPSEGGQVLSLCSSIKEASVKVAEIWIVSLSSQPIDHEDSAMQAGPKTKSTDNYSEEEYESFSSEQ EASDDAVQGQDLDEDDFDVGKPKKQRRSIVRTTSMTRQQNFKQKVVALLRRFKVSEEVLDSEQDPAEHVP EVEEDLDLLYDTLDVENPSDSGPDMDDDDSVLSTPKPKLRPYFEGLSHSSSQTEIGSIHSARSHREPPSP ADVPEKTRSLGGKQQLSDSVSDTVALSAAVPREPSGQPEDSPEAETSTLDVFTEKLPPSGRIIKTESLVI PSTRSESKPAGRRGRSTSLKERQPARPQNERANSLDNERCPDTRSQLQIPRKTVYDQLNHILISDDQLPE NIILVNTSDWQGQFLSDVLQKHTLPVVCTCSAADVQAAFSTIVSRIQRYCNCNSQPPTPVKIAVAGAQHY LSAILRLFVEQLSHKTPDWLGYMRFLIIPLGSHPVARYLGSVDYRYNNFFQDLAWRDLFNKLEAQSSVQD TPDIVSRITQYISGANCAHQLPIAEAMLTYKQKSPDEESSQRFIPFVGVVKVGIVEPSSATSGDSDDAAP SSSSILSSTPPSASTSPAAKEASPTPPSSPSVSGGLSSPSQGVGAELMGLQVDYWTAAQPADRKRDAEKK DMPTTKNTLKCTFRSLQVSRLPSSGEAAATPTMSMTVVTKEKNKKVMFLPKKTKDKEVESKSQCIEGISR LICTAKHQQNMLRVLIDGVECSDVKFFQLAAQWSSHVKHFPICIFGHSKATF
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