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Report for CCDS36537.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
36537.1 |
Public |
Mus musculus |
12 |
Serpina3k |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:20714](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:36537.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:20714](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 12 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 36537.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000043058.4 |
ENSMUSP00000042095.3 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000043058.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000042095.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000043058](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000042095](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_011458.2 |
NP_035588.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_011458.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_035588.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_011458](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_035588](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_035588.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_035588.2 |
418 |
P07759 |
418 |
97.1292% |
0 |
12 |
Chromosomal Locations for CCDS 36537.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1257 nt): ATGGCCTTCATTGTAGCTATGGGGATGATTTTAATGGCTGGAATCTGTCCTGCTGTCCTATGCTTCCCAG ATGGCACAAAGGAAATGGACATTGTATTCCATGAACACCAAGACAATGGGACACAAGATGACAGTCTCAC ATTGGCCTCCGTCAACACTGACTTTGCCTTCAGTCTGTACAAGAAGCTGGCTTTGAAGAATCAAGATAAA AATATTGTCTTCTCCCCACTTAGCATCTCAGCTGCCTTGGCCCTCGTGTCCCTGGGAGCAAAGGGCAAGA CCATGGAAGAGATTTTAGAAGGCCTCAAGTTCAATCTCACAGAGACCCCTGAAGCAGACATCCACCAGGG CTTTGGCAACCTCCTACAGAGTCTCAGCCAGCCAGAAGACCAGGATCAGATAAACATAGGCAATGCCATG TTTATTGAAAAGGACCTGCAGATCCTGGCAGAATTCCATGAGAAGACAAGGGCTCTGTACCAGACTGAGG CCTTCACAGCAGACTTCCAGCAGCCTACTGAGGCCAAAAACCTCATCAATGACTATGTGAGCAATCAGAC CCAGGGGATGATCAAGAAACTGATCTCAGAACTGGATGATGGGACATTGATGGTGCTGGTGAATTACATC TACTTTAAAGGCAAATGGAAGATATCCTTTGACCCCCAGGACACATTTGAGTCTGAGTTCTACTTGGATG AGAAGAGATCTGTGAAGGTTCCCATGATGAAAATGAAGTTACTGACTGCACGCCACTTCCGTGATGAGGA GCTATCGTGCTCTGTGTTGGAGCTGAAGTACACAGGAAATGCCAGTGCCCTGCTCATCCTCCCTGACCAA GGCAGGATGCAGCAGGTGGAAGCCAGCTTACAACCAGAGACCCTGAGGAAATGGAGGAAAACTTTGTTTT CCAGCCAAATAGAGGAGCTAAACCTGCCCAAGTTCTCCATCGCTAGTGACTACAGGCTGGAAGAGGATGT CCTTCCAGAAATGGGGATTAAGGAAGTCTTCACAGAACAAGCTGACCTATCTGGGATCACAGAAGCCAAG AAACTGAGTGTGTCTCAGGTGGTCCACAAGGCTGTGCTGGATGTGGCTGAGACAGGCACAGAAGCAGCTG CTGCCACAGGGGTTATTGGTGGCATTCGTAAGGCCGTATTACCAGCTGTGTGTTTCAACAGGCCATTCCT GATTGTTATCTATCACACAAGTGCTCAGAGTATCCTCTTTATGGCCAAAGTCAATAACCCCAAGTAG
Translation (418 aa): MAFIVAMGMILMAGICPAVLCFPDGTKEMDIVFHEHQDNGTQDDSLTLASVNTDFAFSLYKKLALKNQDK NIVFSPLSISAALALVSLGAKGKTMEEILEGLKFNLTETPEADIHQGFGNLLQSLSQPEDQDQINIGNAM FIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEAKNLINDYVSNQTQGMIKKLISELDDGTLMVLVNYI YFKGKWKISFDPQDTFESEFYLDEKRSVKVPMMKMKLLTARHFRDEELSCSVLELKYTGNASALLILPDQ GRMQQVEASLQPETLRKWRKTLFSSQIEELNLPKFSIASDYRLEEDVLPEMGIKEVFTEQADLSGITEAK KLSVSQVVHKAVLDVAETGTEAAAATGVIGGIRKAVLPAVCFNRPFLIVIYHTSAQSILFMAKVNNPK
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