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Report for CCDS36450.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36450.1 Public Mus musculus 12 Ppp2r3c 23 108 98 CCDS HistoryNCBI Gene:59032Re-query CCDS DB by CCDS ID:36450.1Re-query CCDS DB by GeneID:59032See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36450.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021410.9 ENSMUSP00000021410.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021410.9Link to Ensembl Protein Viewer:ENSMUSP00000021410.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000021410Re-query CCDS DB by Protein ID:ENSMUSP00000021410
Original member NCBI NM_021529.3 NP_067504.2 Updated not alive Link to Nucleotide Sequence:NM_021529.3Link to Protein Sequence:NP_067504.2Re-query CCDS DB by Nucleotide ID:NM_021529Re-query CCDS DB by Protein ID:NP_067504
Current member NCBI NM_021529.4 NP_067504.2 Accepted alive Link to Nucleotide Sequence:NM_021529.4Link to Protein Sequence:NP_067504.2Re-query CCDS DB by Nucleotide ID:NM_021529Re-query CCDS DB by Protein ID:NP_067504Link to BLAST:NP_067504.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067504.2 453 Q9JK24 453 100% 0 0

Chromosomal Locations for CCDS 36450.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 55281617 55281805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55282914 55282973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55284777 55284914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55287921 55288057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55288439 55288514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55288591 55288646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55289660 55289792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55292504 55292574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55293782 55293879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55297778 55297890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55298411 55298515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55298894 55299021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55302594 55302651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1362 nt):
ATGGACTGGAAAGACGTGCTTCGCCGGCGGTTAGCGTCGCCCAACACGGATCCAAAGAGGAAAAAAAGCG
AACAAGAATTAAAAGATGAAGAAATGGATTTATTTACCAAATACTACTCAGAGTGGAAAGGAGGTAGAAA
AAACACAAACGAGTTCTATAAGACCATACCCCGGTTTTATTACAGGTTGCCAGCTGAAGATGAAGTCTTA
CTACAGAAATTACGAGAGGAATCTAGAGCTGTCTTTCTACAGAGGAAAAGCAGAGAACTCTTAGATAACG
AAGAGTTGCAGAACTTATGGTTTTTGCTGGATAAACACCAGATACCACCTATGATTGGAGAGGAAGCAAT
GATCAATTATGAAAATTTTTTGAAGGTTGGTGAAAAGGCTGGACCAAAGTGCAAGCAATTTTTTACTGCA
AAAGTCTTTGCCAAACTCCTTCATACAGATTCATATGGACGAATTTCCATCATGCAGTTCTTTAACTACG
TCATGCGAAAAGTTTGGCTGCATCAGACAAGAATAGGACTCAGTTTATATGATGTTGCTGGCCAAGGATA
CCTTCGGGAATCAGACCTGGAGAACTACATCCTGGAGCTGATCCCGACGCTGCCACAGCTGGACGGGCTG
GAGAAGTCCTTCTACTCCTTCTATGTCTGCACTGCAGTCAGGAAGTTCTTCTTCTTCTTGGACCCTCTAA
GAACAGGGAAGATCAAAATTCAAGATATTTTGGCATGCAGTTTTCTAGATGATTTACTGGAGCTAAGAGA
TGAGGAATTGTCCAAAGAAAGTCAAGAAACAAATTGGTTTTCTGCTCCTTCTGCCCTGAGGGTCTATGGT
CAGTATTTGAATCTTGATAAAGATCATAATGGCATGCTAAGTAAAGAGGAGCTCTCCCGTTACGGAACAG
CAACCATGACCAATGTCTTCTTAGACCGAGTTTTCCAGGAGTGTCTCACTTACGATGGAGAAATGGACTA
TAAGACCTACCTGGACTTTGTTCTTGCCTTAGAAAACAGAAAGGAGCCTGCAGCTCTGCAGTACATTTTC
AAACTGCTGGACATTGAGAACAAGGGATACCTGAATGTCTTTTCCCTTAATTATTTCTTTAGGGCCATAC
AAGAACTAATGAAAATCCATGGACAGGATCCTGTGTCATTTCAAGATGTCAAGGATGAAATCTTTGACAT
GGTCAAACCAAAGGATCCTTTGAAAATCTCACTTCAGGATTTAATCAACAGTAATCAAGGAGACACAGTC
ACTACCATTCTAATTGATCTCAATGGCTTCTGGACCTACGAGAACAGAGAAGCCCTTGTTGCAAATGACA
ACGAGAACTCTGCAGATCTTGATGACACATGA

Translation (453 aa):
MDWKDVLRRRLASPNTDPKRKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVL
LQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQIPPMIGEEAMINYENFLKVGEKAGPKCKQFFTA
KVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGL
EKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYG
QYLNLDKDHNGMLSKEELSRYGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIF
KLLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTV
TTILIDLNGFWTYENREALVANDNENSADLDDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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