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Report for CCDS35715.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35715.1 Public Mus musculus 1 Klhl12 23 108 98 CCDS HistoryNCBI Gene:240756Re-query CCDS DB by CCDS ID:35715.1Re-query CCDS DB by GeneID:240756See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35715.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112232.7 ENSMUSP00000107851.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112232.7Link to Ensembl Protein Viewer:ENSMUSP00000107851.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112232Re-query CCDS DB by Protein ID:ENSMUSP00000107851
Original member NCBI NM_153128.3 NP_694768.1 Updated not alive Link to Nucleotide Sequence:NM_153128.3Link to Protein Sequence:NP_694768.1Re-query CCDS DB by Nucleotide ID:NM_153128Re-query CCDS DB by Protein ID:NP_694768
Current member NCBI NM_153128.4 NP_694768.1 Accepted alive Link to Nucleotide Sequence:NM_153128.4Link to Protein Sequence:NP_694768.1Re-query CCDS DB by Nucleotide ID:NM_153128Re-query CCDS DB by Protein ID:NP_694768Link to BLAST:NP_694768.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694768.1 541 Q8BZM0-2 541 100% 0 0

Chromosomal Locations for CCDS 35715.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 134458472 134458666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 134463827 134463980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 134467651 134467868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 134472394 134472543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 134475788 134475902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 134483747 134483853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 134485718 134485913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 134487010 134487168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 134487644 134487742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 134489016 134489121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 134489332 134489458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1626 nt):
ATGGGCGGCATTATGGCCCCTAAAGACATAATGACAAACACTCACGCTAAGTCCATCCTCAACTCCATGA
ACTCCCTCAGGAAGAGCAACACCCTCTGTGATGTGACCTTGAGAGTGGAGCAGAAAGACTTCCCTGCGCA
TCGGATTGTGCTGGCCGCCTGCAGTGATTATTTCTGTGCCATGTTCACTAGTGAGCTTTCAGAGAAGGGG
AAGCCGTATGTTGACATTCAAGGTTTAACTGCTGCTACCATGGAGATCCTGCTGGACTTCGTGTACACAG
AAACAGTACATGTGACAGTGGAGAATGTTCAAGAACTGCTCCCTGCAGCCTGTCTTCTTCAGCTGAAAGG
TGTGAAACAAGCCTGCTGTGAGTTCTTAGAAAGTCAGCTGGATCCATCTAATTGCCTGGGTATCAGGGAT
TTTGCTGAAACTCACAATTGCGTTGACCTGATGCAAGCAGCTGAGGTGTTTAGCCAGAAGCATTTTCCTG
AAGTGGTGCAGCACGAGGAGTTCATTCTTCTGAGTCAAGGGGAGGTGGAGAAGCTAATCAAGTGCGACGA
GATTCAGGTGGATTCTGAAGAGCCAGTCTTTGAGGCTGTTATCAACTGGGTGAAGCATGCCAAGAAGGAG
CGAGAAGAGTCTTTACCTGACCTCTTACAGTATGTTCGGATGCCCCTGCTGACCCCCAGGTACATTACAG
ATGTAATTGATGCTGAGCCTTTCATCCGCTGTAGTTTACAATGCAGAGATCTAGTTGATGAAGCAAAGAA
GTTTCACCTGAGGCCTGAACTTCGGAGTCAGATGCAAGGACCCAGAACAAGGGCCCGGCTAGGAGCCAAT
GAAGTGCTTCTGGTGGTTGGGGGCTTCGGAAGCCAGCAGTCTCCTATTGATGTGGTAGAGAAGTATGACC
CCAAGACACAGGAGTGGAGCTTTTTACCAAGTATCACTCGCAAGAGACGGTATGTGGCCTCAGTTTCCTT
ACATGATCGGATCTATGTAATTGGTGGCTACGATGGCCGTTCCCGCCTCAGTTCGGTGGAATGTCTAGAC
TATACAGCAGACGAAGATGGAGTGTGGTACTCTGTGGCCCCTATGAATGTGCGGCGAGGCCTTGCTGGAG
CCACCACTCTGGGAGATATGATTTACGTCTCTGGAGGCTTTGATGGAAGTAGGCGTCATACAAGTATGGA
GCGGTATGACCCAAACATCGATCAGTGGAGTATGCTGGGAGATATGCAGACAGCTCGAGAGGGCGCAGGA
CTAGTAGTGGCCAGCGGAATAATCTATTGTCTAGGAGGATATGATGGCTTGAACATATTAAATTCAGTTG
AGAAATATGATCCCCATACAGGACACTGGACTAACGTTACGCCTATGGCCACCAAGCGTTCTGCTTATAA
CATTCGCACTGATTCCTGGACAACTGTCACAAGTATGACCACGCCTCGATGCTATGTAGGGGCCACAGTG
CTTCGAGGGAGACTCTATGCAATTGCAGGATACGATGGGAATTCTCTGCTGAGCAGCATTGAGTGTTATG
ACCCTATCATCGACAGCTGGGAAGTAGTAGCCTCCATGGGAACCCAGCGTTGTGATGCTGGTGTGTGTGT
TCTCCGAGAAAAGTAA

Translation (541 aa):
MGGIMAPKDIMTNTHAKSILNSMNSLRKSNTLCDVTLRVEQKDFPAHRIVLAACSDYFCAMFTSELSEKG
KPYVDIQGLTAATMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLDPSNCLGIRD
FAETHNCVDLMQAAEVFSQKHFPEVVQHEEFILLSQGEVEKLIKCDEIQVDSEEPVFEAVINWVKHAKKE
REESLPDLLQYVRMPLLTPRYITDVIDAEPFIRCSLQCRDLVDEAKKFHLRPELRSQMQGPRTRARLGAN
EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLD
YTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAG
LVVASGIIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSAYNIRTDSWTTVTSMTTPRCYVGATV
LRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVASMGTQRCDAGVCVLREK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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