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Report for CCDS356.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
356.2 Public Homo sapiens 1 TMEM234 24 110 108 CCDS HistoryNCBI Gene:56063Re-query CCDS DB by CCDS ID:356.2Re-query CCDS DB by GeneID:56063See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 356.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309777.11 ENSP00000309792.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309777.11Link to Ensembl Protein Viewer:ENSP00000309792.6Re-query CCDS DB by Nucleotide ID:ENST00000309777Re-query CCDS DB by Protein ID:ENSP00000309792
Original member Current member NCBI NM_019118.5 NP_061991.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019118.5Link to Protein Sequence:NP_061991.3Re-query CCDS DB by Nucleotide ID:NM_019118Re-query CCDS DB by Protein ID:NP_061991Link to BLAST:NP_061991.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061991.3 140 Q8WY98-3 140 100% 0 0

Chromosomal Locations for CCDS 356.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 32216853 32216947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32217259 32217351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32221131 32221197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32221867 32222018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32222307 32222322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (423 nt):
ATGGCGGCGTCTCTGGGGCAGGTGTTGGCTCTGGTGCTGGTGGCCGCTCTGTGGGGTGGCACGCAGCCGC
TGCTGAAGCGGGCCTCCGCCGGCCTGCAGCGGGTTCATGAGCCGACCTGGGCCCAGCAGTTGCTACAGGA
GATGAAGACCCTCTTCTTGAATACTGAGTACCTGATGCCCTTTCTCCTCAACCAGTGTGGATCCCTTCTC
TATTACCTCACCTTGGCATCGACAGATCTGACCCTGGCTGTGCCCATCTGTAACTCTCTGGCTATCATCT
TCACACTGATTGTTGGGAAGGCCCTTGGAGAAGATATTGGTGGAAAACGAGCAGTTGCTGGCATGGTGCT
CACCGTGATAGGAATTTCACTCTGCATCACAAGCTCAGTGAGTAAGACCCAGGGGCAACAGTCTACCCTT
TGA

Translation (140 aa):
MAASLGQVLALVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQLLQEMKTLFLNTEYLMPFLLNQCGSLL
YYLTLASTDLTLAVPICNSLAIIFTLIVGKALGEDIGGKRAVAGMVLTVIGISLCITSSVSKTQGQQSTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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