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Report for CCDS35489.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35489.1 Public Homo sapiens Y DAZ3 24 110 108 CCDS HistoryNCBI Gene:57054Re-query CCDS DB by CCDS ID:35489.1Re-query CCDS DB by GeneID:57054See the combined annotation on chromosome Y in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35489.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382365.7 ENSP00000371802.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000382365.7Link to Ensembl Protein Viewer:ENSP00000371802.2Re-query CCDS DB by Nucleotide ID:ENST00000382365Re-query CCDS DB by Protein ID:ENSP00000371802
Original member Current member NCBI NM_020364.4 NP_065097.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020364.4Link to Protein Sequence:NP_065097.2Re-query CCDS DB by Nucleotide ID:NM_020364Re-query CCDS DB by Protein ID:NP_065097Link to BLAST:NP_065097.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065097.2 438 Q9NR90-2 438 100% 0 0

Chromosomal Locations for CCDS 35489.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome Y (NC_000024.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome YSee the combined annotation on chromosome Y in Sequence Viewer

Chromosome Start Stop Links
Y 24768934 24768997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24773570 24773604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24774350 24774421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24784137 24784208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24786514 24786585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24788894 24788965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24791271 24791342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24793650 24793721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24796027 24796098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24798423 24798494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24800813 24800884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24803256 24803327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24804728 24804867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24804957 24805020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24805457 24805508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24806069 24806160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24806435 24806581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24813183 24813185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1317 nt):
ATGTCTGCTGCAAATCCTGAGACTCCAAACTCAACCATCTCCAGAGAGGCCAGCACCCAGTCTTCATCAG
CTGCAGCTAGCCAAGGCTGGGTGTTACCAGAAGGCAAAATCGTGCCAAACACTGTTTTTGTTGGTGGAAT
TGATGCTAGGATGGATGAAACTGAGATTGGAAGCTGCTTTGGTAGATACGGTTCAGTGAAAGAAGTGAAG
ATAATCACGAATCGAACTGGTGTGTCCAAAGGCTATGGATTTGTTTCGTTTGTTAATGACGTGGATGTCC
AGAAGATAGTAGGATCACAGATACATTTCCATGGTAAAAAGCTGAAGCTGGGCCCTGCAATCAGGAAACA
AAAGTTATGTGCTCGTCATGTGCAGCCACGTCCTTTGGTAGTTAATCCTCCTCCTCCACCACAGTTTCAG
AACGTCTGGCGGAATCCAAACACTGAAACCTACCTGCAGCCCCAAATCACGCCGAATCCTGTAACTCAGC
ACGTTCAGGCTTACTCTGCTTATCCACATTCACCAGGTCAGGTCATCACTGGATGTCAGTTGCTTGTATA
TAATTATCAGGAATATCCTACTTATCCCGATTCAGCATTTCAGGTCACCACTGGATATCAGTTGCCTGTA
TATAATTATCAGCCATTTCCTGCTTATCCAAGATCACCATTTCAGGTCACTGCTGGATATCAGTTGCCTG
TATATAATTATCAGGCATTTCCTGCTTATCCAAATTCACCATTTCAAGTCGCCACTGGATATCAGTTCCC
TGTATACAATTATCAGGCATTTCCTGCTTATCCAAATTCACCAGTTCAGGTCACCACTGGATATCAGTTG
CCTGTATACAATTATCAGGCATTTCCTGCTTATCCAAATTCACCATTTCAAGTCGCCACTGGATATCAGT
TCCCTGTATACAATTATCAGGCATTTCCTGCTTATCCAAATTCACCAGTTCAGGTCACCACTGGATATCA
GTTGCCTGTATACAATTATCAGGCATTTCCTGCTTATCCAAATTCACCATTTCAAGTCGCCACTGGATAT
CAGTTCCCTGTATACAATTATCAGGCATTTCCTGCTTATCCAAATTCACCAGTTCAGGTCACCACTGGAT
ATCAGTTGCCTGTATACAATTATCAGGCATTTCCTGCTTATCCAAATTCAGCAGTTCAGGTCACCACTGG
ATATCAGTTCCATGTATACAATTACCAGATGCCACCGCAGTGCCCTGTTGGGGAGCAAAGGAGAAATCTG
TGGACCGAAGCATACAAATGGTGGTATCTTGTCTGTTTAATCCAGAGAAGAGACTGA

Translation (438 aa):
MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVK
IITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQ
NVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSAFQVTTGYQLPV
YNYQPFPAYPRSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQL
PVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVATGY
QFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNL
WTEAYKWWYLVCLIQRRD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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