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Report for CCDS35348.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35348.1 Public Homo sapiens X ZMAT1 24 110 108 CCDS HistoryNCBI Gene:84460Re-query CCDS DB by CCDS ID:35348.1Re-query CCDS DB by GeneID:84460See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35348.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372782.4 ENSP00000361868.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372782.4Link to Ensembl Protein Viewer:ENSP00000361868.3Re-query CCDS DB by Nucleotide ID:ENST00000372782Re-query CCDS DB by Protein ID:ENSP00000361868
Original member Current member EBI ENST00000540921.5 ENSP00000437529.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540921.5Link to Ensembl Protein Viewer:ENSP00000437529.1Re-query CCDS DB by Nucleotide ID:ENST00000540921Re-query CCDS DB by Protein ID:ENSP00000437529
Original member Current member NCBI NM_001011657.4 NP_001011657.2 Accepted alive Link to Nucleotide Sequence:NM_001011657.4Link to Protein Sequence:NP_001011657.2Re-query CCDS DB by Nucleotide ID:NM_001011657Re-query CCDS DB by Protein ID:NP_001011657Link to BLAST:NP_001011657.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001011657.2 638 Q5H9K5-1 638 100% 0 0

Chromosomal Locations for CCDS 35348.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 101883510 101884821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101886632 101886731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101897868 101898042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101898119 101898220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101904224 101904330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101918513 101918633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1917 nt):
ATGGAGTCTTGCTCTGTCACCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGCCTCCACCTCC
CGGGTTCAAGCGATTCCCCTGCCTCAGCCTCCCAAATAGCTGGGACTACAGACGCCATTTGGAATGAACA
GGAAAAGGCTGAACTTTTTACAGATAAGTTTTGTCAAGTATGTGGAGTGATGCTACAGTTTGAATCACAA
AGAATTTCACATTATGAGGGTGAAAAACATGCTCAAAATGTTAGTTTTTATTTTCAAATGCATGGGGAAC
AAAATGAAGTGCCTGGTAAGAAAATGAAGATGCATGTTGAGAATTTTCAGGTGCATAGGTATGAAGGAGT
GGACAAAAACAAATTTTGTGATCTCTGCAACATGATGTTTAGCTCTCCACTTATTGCTCAGTCTCACTAT
GTGGGAAAGGTCCATGCTAAAAAACTGAAGCAATTAATGGAGGAACATGATCAGGCATCTCCATCAGGAT
TTCAACCAGAGATGGCATTTAGTATGAGAACCTATGTTTGCCATATTTGTAGTATTGCTTTTACATCTTT
AGATATGTTCCGGTCCCACATGCAAGGAAGTGAACATCAAATTAAAGAATCCATTGTTATCAATCTAGTG
AAGAATTCAAGGAAGACACAAGACTCTTACCAAAATGAGTGTGCAGATTACATCAATGTGCAGAAAGCCA
GAGGACTAGAGGCCAAGACTTGTTTCAGAAAGATGGAAGAGAGTTCTTTGGAAACCCGTAGATACAGAGA
AGTGGTCGATTCCAGACCCAGACATAGAATGTTTGAACAAAGACTCCCATTTGAGACTTTCCGGACATAC
GCAGCACCATACAATATTTCACAAGCAATGGAAAAGCAGTTACCTCATTCAAAGAAGACATATGACTCTT
TCCAAGATGAACTTGAAGATTACATCAAAGTACAGAAAGCCAGAGGACTAGATCCAAAGACTTGTTTCAG
AAAGATGAGAGAGAACTCTGTGGATACTCATGGGTACAGAGAAATGGTTGATTCTGGACCCAGATCAAGA
ATGTGTGAGCAAAGATTTTCACATGAGGCTTCCCAGACCTACCAACGACCATACCATATTTCACCAGTGG
AAAGCCAGTTACCTCAGTGGCTACCAACCCATTCAAAGAGGACATATGATTCTTTCCAAGATGAACTTGA
AGATTACATAAAAGTGCAGAAAGCCAGAGGACTAGAGCCAAAAACTTGTTTCAGAAAGATAGGAGATAGC
TCTGTAGAAACACACAGGAACAGAGAAATGGTTGATGTCAGACCCAGACATAGAATGTTGGAGCAAAAGC
TCCCATGTGAGACTTTCCAGACCTATTCAGGACCATATAGTATTTCACAAGTAGTGGAAAACCAGTTACC
TCATTGCTTACCAGCTCATGATAGCAAACAGAGACTAGATTCTATTAGCTACTGTCAACTCACCAGAGAC
TGTTTCCCAGAAAAACCAGTACCCTTGAGCCTTAATCAGCAAGAAAATAACTCTGGCTCATACAGTGTAG
AATCTGAAGTTTACAAGCACCTCTCTTCAGAAAACAATACTGCTGACCATCAAGCAGGTCATAAACGGAA
ACATCAGAAGAGAAAACGACACCTAGAAGAAGGCAAAGAAAGGCCAGAGAAAGAGCAGTCCAAGCATAAA
AGGAAAAAGAGTTATGAAGATACAGATTTAGACAAAGACAAGAGCATCAGACAAAGGAAAAGAGAGGAGG
ATAGAGTCAAGGTCAGTTCAGGAAAGCTTAAGCATCGAAAAAAGAAAAAAAGCCATGATGTACCCTCCGA
GAAAGAAGAACGTAAGCACAGGAAAGAGAAAAAGAAATCTGTTGAAGAAAGGACAGAAGAGGAAATGCTT
TGGGATGAGTCTATTCTTGGATTTTGA

Translation (638 aa):
MESCSVTRLECSGAISAHCSLHLPGSSDSPASASQIAGTTDAIWNEQEKAELFTDKFCQVCGVMLQFESQ
RISHYEGEKHAQNVSFYFQMHGEQNEVPGKKMKMHVENFQVHRYEGVDKNKFCDLCNMMFSSPLIAQSHY
VGKVHAKKLKQLMEEHDQASPSGFQPEMAFSMRTYVCHICSIAFTSLDMFRSHMQGSEHQIKESIVINLV
KNSRKTQDSYQNECADYINVQKARGLEAKTCFRKMEESSLETRRYREVVDSRPRHRMFEQRLPFETFRTY
AAPYNISQAMEKQLPHSKKTYDSFQDELEDYIKVQKARGLDPKTCFRKMRENSVDTHGYREMVDSGPRSR
MCEQRFSHEASQTYQRPYHISPVESQLPQWLPTHSKRTYDSFQDELEDYIKVQKARGLEPKTCFRKIGDS
SVETHRNREMVDVRPRHRMLEQKLPCETFQTYSGPYSISQVVENQLPHCLPAHDSKQRLDSISYCQLTRD
CFPEKPVPLSLNQQENNSGSYSVESEVYKHLSSENNTADHQAGHKRKHQKRKRHLEEGKERPEKEQSKHK
RKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEEML
WDESILGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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