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Report for CCDS35054.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35054.1 Public Homo sapiens 9 GOLM1 24 110 108 CCDS HistoryNCBI Gene:51280Re-query CCDS DB by CCDS ID:35054.1Re-query CCDS DB by GeneID:51280See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35054.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000388711.7 ENSP00000373363.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000388711.7Link to Ensembl Protein Viewer:ENSP00000373363.3Re-query CCDS DB by Nucleotide ID:ENST00000388711Re-query CCDS DB by Protein ID:ENSP00000373363
Original member Current member EBI ENST00000388712.7 ENSP00000373364.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000388712.7Link to Ensembl Protein Viewer:ENSP00000373364.3Re-query CCDS DB by Nucleotide ID:ENST00000388712Re-query CCDS DB by Protein ID:ENSP00000373364
Original member Current member NCBI NM_016548.4 NP_057632.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016548.4Link to Protein Sequence:NP_057632.2Re-query CCDS DB by Nucleotide ID:NM_016548Re-query CCDS DB by Protein ID:NP_057632Link to BLAST:NP_057632.2
Original member Current member NCBI NM_177937.3 NP_808800.1 Accepted alive Link to Nucleotide Sequence:NM_177937.3Link to Protein Sequence:NP_808800.1Re-query CCDS DB by Nucleotide ID:NM_177937Re-query CCDS DB by Protein ID:NP_808800Link to BLAST:NP_808800.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057632.2 401 Q8NBJ4-1 401 100% 0 0
NP_808800.1 401 Q8NBJ4-1 401 100% 0 0

Chromosomal Locations for CCDS 35054.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 86027817 86027893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86033282 86033395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86035368 86035625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86036348 86036507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86040739 86040868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86046470 86046572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86052537 86052591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86077412 86077591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86079192 86079320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1206 nt):
ATGATGGGCTTGGGAAACGGGCGTCGCAGCATGAAGTCGCCGCCCCTCGTGCTGGCCGCCCTGGTGGCCT
GCATCATCGTCTTGGGCTTCAACTACTGGATTGCGAGCTCCCGGAGCGTGGACCTCCAGACACGGATCAT
GGAGCTGGAAGGCAGGGTCCGCAGGGCGGCTGCAGAGAGAGGCGCCGTGGAGCTGAAGAAGAACGAGTTC
CAGGGAGAGCTGGAGAAGCAGCGGGAGCAGCTTGACAAAATCCAGTCCAGCCACAACTTCCAGCTGGAGA
GCGTCAACAAGCTGTACCAGGACGAAAAGGCGGTTTTGGTGAATAACATCACCACAGGTGAGAGGCTCAT
CCGAGTGCTGCAAGACCAGTTAAAGACCCTGCAGAGGAATTACGGCAGGCTGCAGCAGGATGTCCTCCAG
TTTCAGAAGAACCAGACCAACCTGGAGAGGAAGTTCTCCTACGACCTGAGCCAGTGCATCAATCAGATGA
AGGAGGTGAAGGAACAGTGTGAGGAGCGAATAGAAGAGGTCACCAAAAAGGGGAATGAAGCTGTAGCTTC
CAGAGACCTGAGTGAAAACAACGACCAGAGACAGCAGCTCCAAGCCCTCAGTGAGCCTCAGCCCAGGCTG
CAGGCAGCAGGCCTGCCACACACAGAGGTGCCACAAGGGAAGGGAAACGTGCTTGGTAACAGCAAGTCCC
AGACACCAGCCCCCAGTTCCGAAGTGGTTTTGGATTCAAAGAGACAAGTTGAGAAAGAGGAAACCAATGA
GATCCAGGTGGTGAATGAGGAGCCTCAGAGGGACAGGCTGCCGCAGGAGCCAGGCCGGGAGCAGGTGGTG
GAAGACAGACCTGTAGGTGGAAGAGGCTTCGGGGGAGCCGGAGAACTGGGCCAGACCCCACAGGTGCAGG
CTGCCCTGTCAGTGAGCCAGGAAAATCCAGAGATGGAGGGCCCTGAGCGAGACCAGCTTGTCATCCCCGA
CGGACAGGAGGAGGAGCAGGAAGCTGCCGGGGAAGGGAGAAACCAGCAGAAACTGAGAGGAGAAGATGAC
TACAACATGGATGAAAATGAAGCAGAATCTGAGACAGACAAGCAAGCAGCCCTGGCAGGGAATGACAGAA
ACATAGATGTTTTTAATGTTGAAGATCAGAAAAGAGACACCATAAATTTACTTGATCAGCGTGAAAAGCG
GAATCATACACTCTGA

Translation (401 aa):
MMGLGNGRRSMKSPPLVLAALVACIIVLGFNYWIASSRSVDLQTRIMELEGRVRRAAAERGAVELKKNEF
QGELEKQREQLDKIQSSHNFQLESVNKLYQDEKAVLVNNITTGERLIRVLQDQLKTLQRNYGRLQQDVLQ
FQKNQTNLERKFSYDLSQCINQMKEVKEQCEERIEEVTKKGNEAVASRDLSENNDQRQQLQALSEPQPRL
QAAGLPHTEVPQGKGNVLGNSKSQTPAPSSEVVLDSKRQVEKEETNEIQVVNEEPQRDRLPQEPGREQVV
EDRPVGGRGFGGAGELGQTPQVQAALSVSQENPEMEGPERDQLVIPDGQEEEQEAAGEGRNQQKLRGEDD
YNMDENEAESETDKQAALAGNDRNIDVFNVEDQKRDTINLLDQREKRNHTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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