CCDS Report for Consensus CDS

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Report for CCDS3503.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
3503.1	Public	Homo sapiens	4	EXOC1	24	110	108

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3503.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000349598.6	ENSP00000334431.6		Accepted	alive
		NCBI	NM_178237.3	NP_839955.1		Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_839955.1	879	Q9NV70-2	879	100%	0	0

Chromosomal Locations for CCDS 3503.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)

Genome Browser links:

Chromosome	Start	Stop
4	55858324	55858447
4	55860411	55860541
4	55864227	55864386
4	55868336	55868523
4	55870678	55870905
4	55871101	55871233
4	55871849	55871958
4	55877917	55878066
4	55883823	55883928
4	55890223	55890386
4	55891315	55891422
4	55892635	55892711
4	55893552	55893780
4	55896717	55896900
4	55899685	55899884
4	55902344	55902538
4	55904343	55904495

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2640 nt):
ATGACAGCAATCAAGCATGCATTACAAAGAGACATTTTTACACCAAATGATGAACGCCTGCTGAGCATTG TGAATGTCTGCAAAGCAGGAAAAAAGAAAAAGAACTGTTTTTTATGTGCCACAGTGACAACTGAACGCCC TGTGCAGGTTAAGGTGGTCAAAGTCAAGAAATCCGATAAGGGAGATTTCTACAAAAGGCAGATTGCATGG GCCCTTCGAGATCTTGCTGTGGTAGATGCCAAAGATGCTATCAAAGAAAATCCTGAATTTGATTTACACT TTGAAAAAATATATAAATGGGTTGCCAGCAGCACTGCTGAAAAGAATGCATTTATTTCATGCATTTGGAA ATTGAATCAGCGATATCTCCGGAAGAAAATTGATTTTGTCAATGTTAGCTCACAGCTTTTGGAAGAATCT GTTCCAAGTGGAGAAAATCAGAGTGTGACAGGAGGTGATGAAGAAGTAGTAGATGAATACCAAGAGTTAA ATGCAAGAGAAGAACAGGATATCGAAATAATGATGGAAGGCTGTGAATATGCAATCTCGAATGCGGAAGC CTTTGCAGAAAAATTGTCCAGAGAGCTGCAGGTGCTAGATGGGGCTAACATCCAGTCAATCATGGCATCT GAAAAACAAGTCAACATCCTGATGAAATTGCTAGATGAGGCTCTAAAGGAGGTAGATCAGATTGAATTGA AACTGAGCAGTTATGAGGAAATGCTCCAAAGTGTAAAAGAACAAATGGATCAGATCTCTGAAAGCAACCA CCTAATTCATCTTAGTAACACTAATAATGTAAAACTCCTATCTGAGATAGAGTTCCTTGTGAACCACATG GACTTGGCCAAAGGTCATATAAAGGCCCTTCAGGAAGGAGATCTTGCTTCTTCCAGAGGCATTGAGGCCT GCACCAATGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGCTCTTCGACCAGGCCATGACTTGCTTCT GGCAGTCAAACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGCTTTTTGCCCGGAGACTGGCCAGTCAC CTCAACAATGTTTTTGTTCAACAGGGTCATGATCAGAGTTCGACTCTTGCCCAACACTCTGTTGAACTGA CTTTACCCAATCATCATCCATTTCATAGAGATTTGCTCCGATATGCCAAGCTGATGGAGTGGCTAAAGAG TACAGATTATGGAAAATATGAAGGACTAACAAAGAATTACATGGATTATTTATCCCGACTATATGAAAGA GAAATCAAAGATTTCTTTGAAGTTGCAAAGATCAAGATGACTGGCACAACTAAAGAAAGCAAGAAGTTTG GTCTTCATGGAAGTTCGGGGAAATTAACTGGATCTACTTCTAGTCTAAATAAGCTCAGTGTTCAGAGTTC AGGGAATCGCAGATCTCAGTCATCTTCCCTGTTGGATATGGGAAACATGTCTGCCTCTGATCTCGATGTT GCTGACAGGACCAAATTTGATAAGATCTTTGAACAGGTACTAAGTGAACTGGAGCCCCTATGTCTGGCAG AACAGGACTTCATAAGTAAATTTTTCAAACTACAGCAACATCAAAGTATGCCTGGAACTATGGCTGAAGC AGAGGACCTGGATGGAGGAACATTATCACGGCAACATAATTGTGGCACACCACTGCCTGTTTCATCTGAG AAAGATATGATCCGCCAAATGATGATTAAAATATTTCGCTGCATTGAGCCAGAGCTGAACAACCTAATTG CATTAGGAGACAAAATTGATAGCTTTAACTCTCTTTATATGTTAGTCAAAATGAGTCATCATGTGTGGAC TGCACAAAATGTGGACCCTGCTTCTTTCCTAAGTACTACATTGGGAAATGTTTTGGTGACTGTCAAAAGG AACTTTGACAAATGCATTAGTAACCAAATAAGGCAAATGGAAGAAGTAAAGATCTCAAAAAAGAGTAAAG TTGGAATTCTTCCATTTGTTGCTGAATTTGAAGAATTTGCTGGACTTGCAGAATCAATCTTCAAAAATGC TGAGCGTCGTGGAGACCTGGATAAAGCATACACCAAACTTATCAGAGGAGTATTTGTTAATGTGGAGAAA GTAGCAAATGAAAGCCAGAAGACCCCCAGGGATGTGGTTATGATGGAAAACTTTCACCATATTTTTGCAA CTCTTTCTCGATTGAAAATCTCATGTCTAGAAGCAGAAAAAAAAGAAGCCAAACAAAAATACACAGATCA CCTTCAGTCTTATGTCATTTACTCTTTAGGACAACCTCTTGAAAAACTAAATCATTTCTTTGAAGGTGTT GAAGCTCGCGTGGCACAGGGCATAAGGGAGGAGGAAGTAAGTTACCAACTTGCATTTAACAAACAAGAAC TTCGTAAAGTCATTAAGGAGTACCCTGGAAAGGAAGTAAAAAAAGGTCTAGATAACCTCTACAAGAAAGT TGATAAACATTTATGTGAAGAAGAGAACTTACTTCAGGTGGTGTGGCACTCCATGCAAGATGAATTTATA CGCCAGTATAAGCACTTTGAAGGTTTGATAGCTCGCTGTTATCCTGGATCTGGTGTTACAATGGAATTCA CTATTCAGGACATTCTGGATTATTGTTCCAGCATTGCACAGTCCCACTAA
Translation (879 aa):
MTAIKHALQRDIFTPNDERLLSIVNVCKAGKKKKNCFLCATVTTERPVQVKVVKVKKSDKGDFYKRQIAW ALRDLAVVDAKDAIKENPEFDLHFEKIYKWVASSTAEKNAFISCIWKLNQRYLRKKIDFVNVSSQLLEES VPSGENQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEYAISNAEAFAEKLSRELQVLDGANIQSIMAS EKQVNILMKLLDEALKEVDQIELKLSSYEEMLQSVKEQMDQISESNHLIHLSNTNNVKLLSEIEFLVNHM DLAKGHIKALQEGDLASSRGIEACTNAADALLQCMNVALRPGHDLLLAVKQQQQRFSDLRELFARRLASH LNNVFVQQGHDQSSTLAQHSVELTLPNHHPFHRDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYER EIKDFFEVAKIKMTGTTKESKKFGLHGSSGKLTGSTSSLNKLSVQSSGNRRSQSSSLLDMGNMSASDLDV ADRTKFDKIFEQVLSELEPLCLAEQDFISKFFKLQQHQSMPGTMAEAEDLDGGTLSRQHNCGTPLPVSSE KDMIRQMMIKIFRCIEPELNNLIALGDKIDSFNSLYMLVKMSHHVWTAQNVDPASFLSTTLGNVLVTVKR NFDKCISNQIRQMEEVKISKKSKVGILPFVAEFEEFAGLAESIFKNAERRGDLDKAYTKLIRGVFVNVEK VANESQKTPRDVVMMENFHHIFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLGQPLEKLNHFFEGV EARVAQGIREEEVSYQLAFNKQELRKVIKEYPGKEVKKGLDNLYKKVDKHLCEEENLLQVVWHSMQDEFI RQYKHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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