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Report for CCDS35007.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35007.1 Public Homo sapiens 9 DNAJB5 24 110 108 CCDS HistoryNCBI Gene:25822Re-query CCDS DB by CCDS ID:35007.1Re-query CCDS DB by GeneID:25822See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35007.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312316.9 ENSP00000312517.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000312316.9Link to Ensembl Protein Viewer:ENSP00000312517.5Re-query CCDS DB by Nucleotide ID:ENST00000312316Re-query CCDS DB by Protein ID:ENSP00000312517
Original member Current member EBI ENST00000545841.5 ENSP00000441999.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000545841.5Link to Ensembl Protein Viewer:ENSP00000441999.1Re-query CCDS DB by Nucleotide ID:ENST00000545841Re-query CCDS DB by Protein ID:ENSP00000441999
Original member Current member EBI ENST00000684748.1 ENSP00000506753.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684748.1Link to Ensembl Protein Viewer:ENSP00000506753.1Re-query CCDS DB by Nucleotide ID:ENST00000684748Re-query CCDS DB by Protein ID:ENSP00000506753
Original member Current member NCBI NM_001349724.2 NP_001336653.1 Accepted alive Link to Nucleotide Sequence:NM_001349724.2Link to Protein Sequence:NP_001336653.1Re-query CCDS DB by Nucleotide ID:NM_001349724Re-query CCDS DB by Protein ID:NP_001336653Link to BLAST:NP_001336653.1
Original member Current member NCBI NM_012266.6 NP_036398.3 Accepted alive Link to Nucleotide Sequence:NM_012266.6Link to Protein Sequence:NP_036398.3Re-query CCDS DB by Nucleotide ID:NM_012266Re-query CCDS DB by Protein ID:NP_036398Link to BLAST:NP_036398.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001336653.1 348 O75953-3 348 100% 0 0
NP_036398.3 348 O75953-3 348 100% 0 0

Chromosomal Locations for CCDS 35007.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 34993234 34993444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 34996265 34996866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 34997026 34997259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1047 nt):
ATGGGAAAAGATTATTACAAGATTCTTGGGATCCCATCGGGGGCCAACGAGGATGAGATCAAGAAAGCCT
ACCGGAAGATGGCCTTGAAGTACCACCCAGACAAGAATAAAGAACCCAACGCTGAGGAGAAGTTTAAGGA
GATTGCAGAGGCCTATGATGTGCTAAGTGACCCCAAGAAACGGGGCCTGTATGACCAGTATGGGGAGGAA
GGCCTGAAGACCGGCGGTGGCACATCAGGTGGCTCCAGTGGCTCCTTTCACTACACCTTTCATGGGGACC
CCCATGCCACCTTTGCCTCCTTCTTTGGTGGCTCCAACCCCTTCGATATCTTCTTTGCCAGCAGCCGCTC
CACTCGGCCCTTCAGTGGCTTTGACCCAGATGACATGGATGTGGATGAAGATGAGGACCCATTTGGCGCT
TTCGGCCGTTTTGGCTTCAATGGGCTGAGTAGGGGTCCAAGGCGAGCCCCAGAACCACTGTACCCTCGGC
GCAAGGTGCAGGACCCCCCAGTGGTGCACGAGCTGCGGGTGTCCCTGGAGGAGATCTACCATGGCTCCAC
CAAGCGCATGAAGATCACAAGGCGTCGCCTCAACCCTGATGGGCGAACTGTGCGCACCGAGGACAAGATC
CTGCACATAGTCATCAAGCGTGGCTGGAAGGAAGGCACCAAGATCACCTTCCCCAAAGAAGGCGACGCCA
CACCTGACAACATCCCTGCTGACATCGTCTTTGTGCTCAAAGACAAGCCCCATGCACACTTCCGCCGAGA
TGGCACCAACGTGCTCTACAGTGCCCTGATCAGCCTCAAGGAGGCGCTGTGTGGCTGCACTGTGAACATT
CCCACTATCGACGGCCGAGTGATCCCTTTGCCCTGCAATGATGTCATCAAGCCAGGCACCGTGAAGAGAC
TCCGTGGGGAGGGCCTTCCCTTCCCCAAAGTGCCAACTCAGCGAGGAGACCTCATTGTTGAGTTCAAAGT
TCGCTTCCCAGACAGATTAACACCACAGACAAGACAGATCCTTAAGCAGCACCTACCCTGTTCCTAG

Translation (348 aa):
MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEE
GLKTGGGTSGGSSGSFHYTFHGDPHATFASFFGGSNPFDIFFASSRSTRPFSGFDPDDMDVDEDEDPFGA
FGRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKI
LHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNI
PTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLPCS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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