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Report for CCDS34960.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34960.1 Public Homo sapiens 8 PARP10 24 110 108 CCDS HistoryNCBI Gene:84875Re-query CCDS DB by CCDS ID:34960.1Re-query CCDS DB by GeneID:84875See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34960.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313028.12 ENSP00000325618.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313028.12Link to Ensembl Protein Viewer:ENSP00000325618.7Re-query CCDS DB by Nucleotide ID:ENST00000313028Re-query CCDS DB by Protein ID:ENSP00000325618
Original member Current member NCBI NM_032789.5 NP_116178.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032789.5Link to Protein Sequence:NP_116178.2Re-query CCDS DB by Nucleotide ID:NM_032789Re-query CCDS DB by Protein ID:NP_116178Link to BLAST:NP_116178.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116178.2 1025 Q53GL7 1025 100% 0 0

Chromosomal Locations for CCDS 34960.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 143977484 143977830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143977907 143978081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143982932 143983065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143983167 143983811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143984008 143984104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143984210 143984431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143984544 143985328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143985412 143985648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143985721 143985975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143986055 143986233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143986358 143986359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3078 nt):
ATGGTTGCAATGGCGGAGGCAGAGGCAGGGGTGGCAGTGGAGGTCCGTGGACTGCCCCCTGCCGTGCCCG
ACGAGCTGCTCACTCTCTACTTTGAAAACCGCCGACGCTCTGGAGGGGGACCTGTGTTGAGCTGGCAGAG
ACTGGGCTGTGGGGGCGTCCTCACCTTCAGAGAGCCTGCAGACGCCGAGAGGGTCTTGGCCCAGGCAGAT
CACGAACTACATGGTGCCCAGCTGAGCCTGCGGCCAGCTCCACCACGAGCCCCTGCACGCCTGCTGCTCC
AAGGACTGCCCCCTGGCACCACGCCCCAGCGCTTGGAGCAGCATGTCCAGGCCTTGCTGCGGGCCTCGGG
GCTCCCAGTACAGCCTTGCTGTGCCTTGGCCAGCCCCCGGCCAGACCGGGCTCTGGTCCAGTTGCCCAAG
CCCCTTTCTGAGGCAGATGTCCGTGTCCTGGAGGAGCAGGCCCAGAATCTGGGCCTGGAGGGGACCTTGG
TGTCCCTGGCCCGGGTTCCCCAGGCCCGAGCGGTGCGTGTGGTGGGGGATGGTGCCTCTGTGGACCTGCT
GTTGCTGGAGTTGTACCTGGAGAATGAGCGCCGCAGTGGTGGGGGGCCCCTGGAGGACCTGCAACGCCTA
CCCGGGCCCCTGGGCACTGTTGCCTCCTTCCAGCAGTGGCAAGTGGCAGAACGAGTGTTGCAGCAGGAGC
ACCGGTTGCAGGGCTCAGAGCTGAGCCTTGTCCCCCACTACGACATCCTGGAGCCCGAGGAGCTGGCTGA
GAACACCAGTGGAGGGGACCACCCGTCCACCCAGGGGCCTAGGGCTACCAAGCATGCTCTCCTGAGGACC
GGAGGGTTGGTGACGGCTCTGCAGGGTGCAGGGACTGTGACAATGGGCTCTGGCGAGGAACCAGGGCAGT
CAGGGGCCTCTCTGAGGACAGGTCCCATGGTGCAGGGTAGAGGGATTATGACAACAGGCTCTGGCCAGGA
ACCAGGGCAGTCAGGGACCTCTCTGAGGACAGGTCCCATGGGGTCTCTGGGACAGGCAGAGCAAGTCAGC
TCGATGCCCATGGGGTCTCTGGAACATGAGGGGCTGGTAAGCCTGAGGCCTGTGGGGTTGCAGGAACAGG
AGGGGCCCATGAGCCTGGGGCCTGTGGGGTCTGCAGGCCCAGTGGAGACCTCTAAGGGGTTGCTGGGGCA
GGAGGGCCTGGTGGAAATTGCCATGGACTCACCAGAGCAAGAGGGGCTGGTGGGTCCCATGGAGATCACC
ATGGGGTCTCTGGAGAAGGCAGGGCCTGTGAGCCCAGGATGTGTGAAGCTGGCAGGGCAGGAGGGCCTGG
TGGAGATGGTGCTATTGATGGAGCCAGGGGCGATGCGCTTCCTGCAGCTCTACCATGAGGACCTTCTTGC
GGGCCTGGGAGACGTCGCTCTCTTGCCACTTGAAGGACCGGATATGACTGGCTTTCGGCTCTGTGGAGCC
CAGGCTTCCTGCCAGGCGGCTGAGGAGTTTCTGCGGAGCCTGCTGGGCAGCATTAGCTGCCATGTGTTGT
GCCTGGAGCACCCGGGCAGCGCCAGGTTTCTCCTGGGCCCAGAAGGGCAGCACCTTCTCCAGGGGCTGGA
GGCTCAGTTCCAGTGTGTCTTTGGGACAGAGCGCCTGGCCACAGCCACGTTGGACACAGGCCTTGAAGAG
GTGGACCCTACCGAGGCCCTCCCAGTGCTCCCTGGCAACGCCCACACCCTGTGGACCCCAGACAGTACAG
GTGGTGACCAGGAGGACGTGAGCCTGGAGGAGGTCCGAGAACTGCTGGCCACCCTGGAGGGCCTAGACCT
AGACGGGGAGGACTGGCTGCCTCGGGAGCTGGAGGAGGAAGGGCCTCAGGAGCAGCCAGAGGAGGAGGTG
ACCCCAGGGCATGAGGAGGAGGAGCCTGTGGCCCCCAGCACTGTGGCACCCAGGTGGCTGGAGGAGGAGG
CCGCTCTGCAGCTGGCCCTCCACCGGTCACTGGAGCCTCAAGGTCAGGTGGCTGAGCAGGAGGAGGCTGC
TGCCCTGCGGCAAGCCCTAACCCTCTCCCTGCTGGAGCAGCCCCCGTTGGAGGCAGAAGAGCCCCCAGAT
GGGGGGACTGATGGCAAGGCCCAGCTGGTGGTGCACTCGGCCTTTGAGCAGGATGTGGAGGAGCTGGACC
GGGCGCTCAGGGCTGCCTTGGAGGTCCACGTCCAGGAGGAGACGGTGGGGCCCTGGCGCCGCACACTGCC
TGCAGAGCTGCGTGCTCGCCTGGAGCGGTGCCATGGTGTGAGTGTTGCCCTGCGTGGTGACTGCACCATC
CTCCGTGGCTTCGGGGCCCACCCTGCCCGTGCTGCCCGCCACTTGGTGGCACTTCTGGCTGGCCCCTGGG
ATCAGAGTTTGGCCTTTCCCTTGGCAGCTTCAGGCCCTACCTTGGCGGGGCAGACGCTGAAGGGGCCCTG
GAACAACCTGGAGCGTCTGGCAGAGAACACCGGGGAGTTCCAGGAGGTGGTGCGGGCCTTCTACGACACC
CTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGC
AGTATGAGCTGTACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCTGTACCA
CGGCACGACGGCACCGGCAGTGCCTGACATCTGCGCCCACGGCTTCAACCGCAGCTTCTGCGGCCGCAAC
GCCACGGTCTACGGGAAGGGCGTGTATTTCGCCAGGCGCGCCTCCCTGTCGGTGCAGGACCGCTACTCGC
CCCCCAACGCCGATGGCCATAAGGCGGTGTTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGGGCCG
CCGCGGTCTGCGGGCGCCCCCTCTGCGGGGTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGAC
TGCATCTGCCAGCCCAGCATCTTCGTCATCTTCCACGACACCCAGGCGCTGCCCACCCACCTCATCACCT
GCGAGCACGTGCCCCGCGCTTCCCCCGACGACCCCTCTGGGCTCCCGGGCCGCTCCCCAGACACTTAA

Translation (1025 aa):
MVAMAEAEAGVAVEVRGLPPAVPDELLTLYFENRRRSGGGPVLSWQRLGCGGVLTFREPADAERVLAQAD
HELHGAQLSLRPAPPRAPARLLLQGLPPGTTPQRLEQHVQALLRASGLPVQPCCALASPRPDRALVQLPK
PLSEADVRVLEEQAQNLGLEGTLVSLARVPQARAVRVVGDGASVDLLLLELYLENERRSGGGPLEDLQRL
PGPLGTVASFQQWQVAERVLQQEHRLQGSELSLVPHYDILEPEELAENTSGGDHPSTQGPRATKHALLRT
GGLVTALQGAGTVTMGSGEEPGQSGASLRTGPMVQGRGIMTTGSGQEPGQSGTSLRTGPMGSLGQAEQVS
SMPMGSLEHEGLVSLRPVGLQEQEGPMSLGPVGSAGPVETSKGLLGQEGLVEIAMDSPEQEGLVGPMEIT
MGSLEKAGPVSPGCVKLAGQEGLVEMVLLMEPGAMRFLQLYHEDLLAGLGDVALLPLEGPDMTGFRLCGA
QASCQAAEEFLRSLLGSISCHVLCLEHPGSARFLLGPEGQHLLQGLEAQFQCVFGTERLATATLDTGLEE
VDPTEALPVLPGNAHTLWTPDSTGGDQEDVSLEEVRELLATLEGLDLDGEDWLPRELEEEGPQEQPEEEV
TPGHEEEEPVAPSTVAPRWLEEEAALQLALHRSLEPQGQVAEQEEAAALRQALTLSLLEQPPLEAEEPPD
GGTDGKAQLVVHSAFEQDVEELDRALRAALEVHVQEETVGPWRRTLPAELRARLERCHGVSVALRGDCTI
LRGFGAHPARAARHLVALLAGPWDQSLAFPLAASGPTLAGQTLKGPWNNLERLAENTGEFQEVVRAFYDT
LDAARSSIRVVRVERVSHPLLQQQYELYRERLLQRCERRPVEQVLYHGTTAPAVPDICAHGFNRSFCGRN
ATVYGKGVYFARRASLSVQDRYSPPNADGHKAVFVARVLTGDYGQGRRGLRAPPLRGPGHVLLRYDSAVD
CICQPSIFVIFHDTQALPTHLITCEHVPRASPDDPSGLPGRSPDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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