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Report for CCDS34959.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34959.2 Public Homo sapiens 8 NRBP2 24 110 108 CCDS HistoryNCBI Gene:340371Re-query CCDS DB by CCDS ID:34959.2Re-query CCDS DB by GeneID:340371See the combined annotation on chromosome 8 in Sequence Viewer

Public Note for CCDS 34959.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 34959.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000442628.7 ENSP00000414055.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000442628.7Link to Ensembl Protein Viewer:ENSP00000414055.2Re-query CCDS DB by Nucleotide ID:ENST00000442628Re-query CCDS DB by Protein ID:ENSP00000414055
Original member Current member NCBI NM_178564.4 NP_848659.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178564.4Link to Protein Sequence:NP_848659.2Re-query CCDS DB by Nucleotide ID:NM_178564Re-query CCDS DB by Protein ID:NP_848659Link to BLAST:NP_848659.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848659.2 501 Q9NSY0-3 501 100% 0 0

Chromosomal Locations for CCDS 34959.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 143835662 143835730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143835820 143835875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143835967 143836030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143836127 143836180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143837039 143837174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143837249 143837299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143837407 143837509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143837623 143837755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143838680 143838775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143838883 143838938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143839017 143839100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143839172 143839195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143839314 143839408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143839509 143839549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143839736 143839825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143839929 143840030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143840107 143840229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143840706 143840834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1506 nt):
ATGGCGGCCCCGGAGCCGGCGCCGAGGCGGGCCCGGGAACGGGAGCGGGAGCGGGAGGACGAGAGCGAGG
ACGAGAGCGACATCCTGGAGGAAAGCCCGTGTGGTCGCTGGCAAAAGCGACGGGAGCAGGTAAACCAAGG
GAACATGCCAGGGCTTCAGAGCACCTTCCTAGCCATGGACACGGAGGAGGGGGTAGAGGTGGTGTGGAAC
GAGCTCCACTTCGGAGACAGGAAGGCCTTCGCGGCGCACGAGGAGAAGATCCAGACCGTGTTCGAGCAGC
TGGTGCTGGTGGACCACCCGAACATCGTGAAGTTGCACAAGTACTGGCTGGATACCTCTGAGGCCTGCGC
GAGGGTCATCTTCATCACAGAGTACGTGTCATCAGGCAGCCTCAAGCAATTCCTCAAAAAGACCAAGAAG
AACCACAAGGCCATGAACGCCCGGGCCTGGAAGCGCTGGTGCACGCAGATCCTGTCTGCGCTCAGCTTCC
TGCACGCCTGCAGCCCCCCAATCATCCACGGGAACCTGACCAGCGACACCATCTTCATTCAGCACAACGG
CCTCATCAAGATCGGCTCCGTGTGGCACCGAATCTTCTCCAATGCACTTCCAGATGATCTCCGAAGCCCC
ATCCGCGCTGAGCGAGAGGAACTTCGGAACCTGCACTTCTTCCCCCCAGAGTATGGAGAGGTGGCCGATG
GGACCGCTGTGGACATCTTCTCCTTTGGGATGTGTGCGCTGGAGATGGCTGTACTGGAAATCCAGACCAA
TGGGGACACCCGGGTCACAGAGGAGGCCATTGCTCGCGCCAGGCACTCGCTGAGTGACCCCAACATGCGG
GAGTTCATCCTTTGCTGCCTGGCCCGGGACCCTGCCCGCCGGCCCTCTGCCCACAGCCTCCTCTTCCACC
GCGTGCTCTTCGAGGTGCACTCGCTGAAGCTCCTGGCAGCCCACTGCTTCATCCAGCACCAGTACCTCAT
GCCTGAGAATGTGGTGGAGGAGAAGACCAAGGCCATGGACCTGCACGCGGTCTTGGCGGAGCTTCCCCGG
CCCCGCAGGCCCCCGCTGCAGTGGCGGTACTCGGAAGTCTCCTTCATGGAGCTGGACAAATTCCTGGAGG
ATGTCAGGAATGGAATCTACCCACTGATGAACTTTGCAGCCACTCGACCCCTGGGGCTGCCCCGTGTGCT
GGCCCCACCCCCGGAGGAGGTCCAAAAGGCCAAGACCCCGACGCCAGAGCCCTTTGACTCTGAGACCAGA
AAGGTCATCCAGATGCAGTGCAACCTGGAGAGAAGCGAGGACAAGGCGCGCTGGCATCTCACTCTGCTTC
TGGTGCTGGAAGACCGGCTGCACCGGCAGCTGACCTACGACCTGCTCCCAACGGACAGCGCCCAGGACCT
CGCCTCGGAGCTCGTGCACTATGGCTTCCTCCACGAGGACGACCGGATGAAGCTGGCCGCCTTCCTGGAG
AGCACCTTCCTCAAGTACCGTGGGACCCAGGCCTGA

Translation (501 aa):
MAAPEPAPRRAREREREREDESEDESDILEESPCGRWQKRREQVNQGNMPGLQSTFLAMDTEEGVEVVWN
ELHFGDRKAFAAHEEKIQTVFEQLVLVDHPNIVKLHKYWLDTSEACARVIFITEYVSSGSLKQFLKKTKK
NHKAMNARAWKRWCTQILSALSFLHACSPPIIHGNLTSDTIFIQHNGLIKIGSVWHRIFSNALPDDLRSP
IRAEREELRNLHFFPPEYGEVADGTAVDIFSFGMCALEMAVLEIQTNGDTRVTEEAIARARHSLSDPNMR
EFILCCLARDPARRPSAHSLLFHRVLFEVHSLKLLAAHCFIQHQYLMPENVVEEKTKAMDLHAVLAELPR
PRRPPLQWRYSEVSFMELDKFLEDVRNGIYPLMNFAATRPLGLPRVLAPPPEEVQKAKTPTPEPFDSETR
KVIQMQCNLERSEDKARWHLTLLLVLEDRLHRQLTYDLLPTDSAQDLASELVHYGFLHEDDRMKLAAFLE
STFLKYRGTQA


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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