NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS34794.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34794.1 Public Homo sapiens 8 ARHGEF10 24 110 108 CCDS HistoryNCBI Gene:9639Re-query CCDS DB by CCDS ID:34794.1Re-query CCDS DB by GeneID:9639See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34794.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000349830.8 ENSP00000340297.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000349830.8Link to Ensembl Protein Viewer:ENSP00000340297.3Re-query CCDS DB by Nucleotide ID:ENST00000349830Re-query CCDS DB by Protein ID:ENSP00000340297
Original member Current member NCBI NM_014629.4 NP_055444.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014629.4Link to Protein Sequence:NP_055444.2Re-query CCDS DB by Nucleotide ID:NM_014629Re-query CCDS DB by Protein ID:NP_055444Link to BLAST:NP_055444.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055444.2 1344 O15013-5 1344 100% 0 0

Chromosomal Locations for CCDS 34794.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 1843400 1843436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1857960 1858115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1859897 1860184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1864373 1864436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1866526 1866602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1869194 1869250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1876571 1876734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1880048 1880164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1882635 1882749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1885601 1885707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1893569 1893646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1894393 1894572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1896333 1896449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1898433 1898525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1903281 1903451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1905571 1905716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1909295 1909470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1922964 1923079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1923468 1923595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1923774 1923874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1925283 1925404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1926377 1926463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1928427 1928650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1929286 1929443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1933800 1933942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1945481 1945655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1952705 1952827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 1956749 1957263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4035 nt):
ATGGACCAGCGAGAGCCCCTGCCTCCCGCTCCTGCAGAAAATGAAATGAAATATGATACCAATAATAATG
AAGAGGAAGAGGGAGAACAGTTCGATTTTGACAGTGGAGATGAAATCCCAGAAGCGGACAGACAGGCCCC
ATCCGCCCCTGAGACAGGAGGTGCTGGAGCCAGTGAAGCCCCTGCACCCACAGGAGGTGAGGATGGAGCT
GGAGCAGAAACCACCCCAGTGGCAGAGCCTACTAAGCTGGTGCTCCCGATGAAAGTCAACCCATATTCTG
TCATCGACATCACGCCATTCCAGGAGGACCAGCCGCCCACCCCCGTGCCCAGCGCTGAGGAGGAGAATGT
GGGTCTCCATGTGCCCTGCGGGTACTTGGTGCCTGTACCCTGCGGCTATGCGGTGCCCTCCAACCTGCCC
CTCCTGCTGCCCGCCTACTCCAGCCCGGTCATCATCTGCGCCACGTCCCTGGACGAAGAAGAAACACCAG
AAGTCACAGAAGATCGCCAGCCCAATTCTCTGAGTTCCGAGGAGCCTCCAACCAGTGAAGATCAAGTCGG
TCGAGAGGACAGCGCACTTGCCCGCTGGGCCGCAGACCCGGCCAACACAGCCTGGATGGAGAATCCAGAG
GAAGCAATTTACGATGACGTTCCAAGGGAAAACTCAGACTCTGAACCAGATGAAATGATTTATGATGATG
TTGAGAATGGGGATGAAGGTGGAAACAGCTCCTTGGAATACGGATGGAGTTCGAGTGAATTTGAAAGTTA
CGAAGAGCAGAGTGACTCGGAGTGCAAGAATGGGATTCCCAGGTCCTTCCTGCGCAGCAACCACAAAAAG
CAACTTTCTCATGACCTAACCCGTTTAAAGGAGCACTATGAGAAAAAGATGAGAGATTTGATGGCAAGCA
CGGTGGGCGTGGTGGAGATTCAGCAGCTCAGGCAGAAGCATGAACTGAAGATGCAGAAGCTCGTGAAGGC
CGCGAAGGACGGCACCAAGGACGGGCTGGAGAGGACCAGGGCAGCCGTGAAGAGGGGCCGCTCCTTCATC
AGGACCAAGTCTCTCATCGCACAGGATCACAGATCTTCTCTTGAGGAAGAACAGAATTTGTTCATTGATG
TTGACTGCAAGCACCCGGAAGCCATCTTGACCCCGATGCCCGAGGGTTTATCTCAGCAGCAGGTTGTAAG
AAGATATATACTGGGTTCAGTTGTCGACAGTGAAAAGAACTACGTAGATGCTCTTAAGAGGATTTTGGAG
CAATATGAGAAGCCGCTGTCTGAGATGGAGCCAAAGGTTCTGAGTGAGAGGAAGCTGAAGACGGTGTTCT
ACCGAGTCAAAGAGATCCTGCAGTGCCACTCGCTATTTCAGATCGCGCTGGCCAGCCGCGTTTCCGAGTG
GGACTCCGTGGAAATGATAGGCGATGTCTTCGTGGCTTCGTTTTCTAAGTCCATGGTGCTGGATGCATAC
AGTGAATATGTGAACAATTTCAGCACAGCCGTGGCAGTCCTCAAGAAAACATGTGCCACAAAGCCCGCTT
TTCTTGAATTTTTAAAGCAGGAACAGGAGGCCAGCCCCGATCGAACCACGCTCTACAGCCTGATGATGAA
GCCCATCCAGAGGTTCCCACAGTTCATCCTCCTGCTCCAGGACATGCTGAAGAACACCTCCAAAGGCCAC
CCCGACAGGCTGCCTCTTCAGATGGCCCTGACAGAGCTCGAAACACTAGCAGAGAAGTTAAATGAAAGAA
AGAGAGATGCTGATCAACGCTGTGAAGTGAAGCAAATAGCCAAAGCCATAAACGAAAGATACCTGAACAA
GCTTCTCAGCAGTGGAAGCCGATACCTCATTCGATCAGATGATATGATAGAAACAGTTTACAACGACAGA
GGAGAGATTGTTAAAACCAAAGAACGCCGAGTCTTCATGTTAAATGATGTGTTAATGTGTGCCACCGTCA
GCTCACGCCCCTCTCATGACAGCCGTGTGATGAGCAGCCAGAGGTACTTGCTGAAGTGGAGCGTTCCACT
GGGACATGTGGACGCCATCGAGTATGGCAGCAGCGCAGGCACGGGCGAGCACAGCAGGCACCTTGCCGTT
CACCCGCCGGAGAGCCTGGCCGTGGTTGCTAACGCGAAACCAAACAAAGTTTACATGGGGCCAGGACAAC
TGTATCAAGATTTACAAAACTTGTTGCATGACTTAAATGTAATTGGCCAAATCACTCAGCTGATAGGAAA
CCTTAAAGGAAACTATCAGAACTTAAACCAGTCAGTAGCCCATGACTGGACATCAGGTTTACAAAGGCTT
ATTTTGAAGAAAGAAGATGAAATCAGAGCTGCGGACTGCTGCAGAATTCAGTTACAGCTTCCCGGGAAGC
AGGACAAATCTGGGCGACCGACGTTCTTTACAGCTGTGTTCAATACGTTCACCCCTGCCATCAAGGAGTC
CTGGGTCAACAGCTTACAGATGGCCAAGCTCGCCCTAGAAGAGGAGAACCACATGGGCTGGTTCTGTGTG
GAAGACGATGGGAATCACATTAAAAAGGAGAAGCATCCTCTCCTCGTCGGACACATGCCCGTGATGGTGG
CCAAGCAGCAGGAGTTCAAGATTGAATGTGCTGCTTATAACCCTGAACCTTACCTAAATAATGAAAGCCA
GCCAGATTCATTTTCCACGGCACATGGTTTCCTGTGGATCGGAAGTTGCACCCATCAAATGGGTCAGATT
GCCATCGTCTCGTTTCAAAATTCCACTCCCAAAGTCATTGAGTGCTTCAACGTGGAATCTCGCATCCTGT
GCATGCTGTACGTTCCCGTCGAGGAGAAGCGCAGAGAGCCTGGGGCACCCCCGGACCCCGAGACCCCGGC
CGTGAGAGCTTCTGATGTCCCCACGATCTGTGTAGGGACGGAGGAGGGAAGCATTTCCATTTATAAAAGC
AGTCAAGGCTCCAAGAAAGTGAGACTTCAGCACTTTTTCACTCCTGAGAAGTCCACAGTCATGAGCCTGG
CTTGCACGTCTCAGAGCCTGTACGCTGGCCTGGTCAACGGGGCAGTCGCCAGCTACGCCAGAGCCCCAGA
TGGATCCTGGGATTCAGAACCTCAAAAAGTGATCAAGTTAGGCGTCCTACCAGTTAGAAGTCTACTCATG
ATGGAAGACACGTTGTGGGCGGCTTCCGGAGGTCAAGTCTTCATCATCAGTGTGGAGACTCATGCTGTAG
AGGGTCAGCTGGAGGCCCACCAGGAGGAAGGCATGGTGATCTCCCACATGGCCGTGTCCGGCGTCGGGAT
CTGGATTGCCTTCACCTCAGGGTCCACGCTCCGCCTTTTTCACACGGAAACTCTCAAGCACCTGCAGGAC
ATCAACATCGCCACCCCTGTTCACAACATGCTGCCAGGGCACCAGCGGCTGTCGGTGACGAGCCTGCTCG
TCTGCCACGGATTGCTGATGGTCGGCACCAGCCTGGGAGTCCTCGTGGCCCTGCCGGTCCCACGTCTGCA
AGGGATTCCCAAAGTGACCGGAAGAGGCATGGTCTCCTACCATGCACACAACAGTCCTGTCAAATTCATC
GTCCTGGCCACGGCTCTGCACGAGAAAGACAAGGACAAATCCAGGGACAGCCTGGCTCCTGGCCCCGAGC
CTCAGGACGAAGACCAGAAGGACGCACTTCCGAGTGGAGGAGCTGGTTCATCTCTGAGCCAGGGTGACCC
TGACGCAGCCATCTGGTTGGGAGATTCGCTGGGATCGATGACTCAGAAAAGCGACCTGTCCTCCTCATCT
GGGTCCCTGAGCTTGTCTCACGGCTCCAGCTCTCTAGAGCACAGATCAGAGGACAGCACCATCTATGATC
TCCTGAAGGATCCTGTCTCGCTGAGAAGCAAAGCACGCCGGGCCAAGAAAGCCAAGGCCAGCTCGGCGCT
GGTGGTCTGTGGAGGGCAGGGCCACCGCCGGGTGCACAGGAAGGCCCGGCAGCCCCACCAGGAAGAGCTG
GCGCCGACCGTCATGGTCTGGCAGATCCCTCTGCTGAATATATAA

Translation (1344 aa):
MDQREPLPPAPAENEMKYDTNNNEEEEGEQFDFDSGDEIPEADRQAPSAPETGGAGASEAPAPTGGEDGA
GAETTPVAEPTKLVLPMKVNPYSVIDITPFQEDQPPTPVPSAEEENVGLHVPCGYLVPVPCGYAVPSNLP
LLLPAYSSPVIICATSLDEEETPEVTEDRQPNSLSSEEPPTSEDQVGREDSALARWAADPANTAWMENPE
EAIYDDVPRENSDSEPDEMIYDDVENGDEGGNSSLEYGWSSSEFESYEEQSDSECKNGIPRSFLRSNHKK
QLSHDLTRLKEHYEKKMRDLMASTVGVVEIQQLRQKHELKMQKLVKAAKDGTKDGLERTRAAVKRGRSFI
RTKSLIAQDHRSSLEEEQNLFIDVDCKHPEAILTPMPEGLSQQQVVRRYILGSVVDSEKNYVDALKRILE
QYEKPLSEMEPKVLSERKLKTVFYRVKEILQCHSLFQIALASRVSEWDSVEMIGDVFVASFSKSMVLDAY
SEYVNNFSTAVAVLKKTCATKPAFLEFLKQEQEASPDRTTLYSLMMKPIQRFPQFILLLQDMLKNTSKGH
PDRLPLQMALTELETLAEKLNERKRDADQRCEVKQIAKAINERYLNKLLSSGSRYLIRSDDMIETVYNDR
GEIVKTKERRVFMLNDVLMCATVSSRPSHDSRVMSSQRYLLKWSVPLGHVDAIEYGSSAGTGEHSRHLAV
HPPESLAVVANAKPNKVYMGPGQLYQDLQNLLHDLNVIGQITQLIGNLKGNYQNLNQSVAHDWTSGLQRL
ILKKEDEIRAADCCRIQLQLPGKQDKSGRPTFFTAVFNTFTPAIKESWVNSLQMAKLALEEENHMGWFCV
EDDGNHIKKEKHPLLVGHMPVMVAKQQEFKIECAAYNPEPYLNNESQPDSFSTAHGFLWIGSCTHQMGQI
AIVSFQNSTPKVIECFNVESRILCMLYVPVEEKRREPGAPPDPETPAVRASDVPTICVGTEEGSISIYKS
SQGSKKVRLQHFFTPEKSTVMSLACTSQSLYAGLVNGAVASYARAPDGSWDSEPQKVIKLGVLPVRSLLM
MEDTLWAASGGQVFIISVETHAVEGQLEAHQEEGMVISHMAVSGVGIWIAFTSGSTLRLFHTETLKHLQD
INIATPVHNMLPGHQRLSVTSLLVCHGLLMVGTSLGVLVALPVPRLQGIPKVTGRGMVSYHAHNSPVKFI
VLATALHEKDKDKSRDSLAPGPEPQDEDQKDALPSGGAGSSLSQGDPDAAIWLGDSLGSMTQKSDLSSSS
GSLSLSHGSSSLEHRSEDSTIYDLLKDPVSLRSKARRAKKAKASSALVVCGGQGHRRVHRKARQPHQEEL
APTVMVWQIPLLNI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH