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Report for CCDS34753.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34753.1 Public Homo sapiens 7 ZC3HC1 24 110 108 CCDS HistoryNCBI Gene:51530Re-query CCDS DB by CCDS ID:34753.1Re-query CCDS DB by GeneID:51530See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34753.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358303.9 ENSP00000351052.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358303.9Link to Ensembl Protein Viewer:ENSP00000351052.4Re-query CCDS DB by Nucleotide ID:ENST00000358303Re-query CCDS DB by Protein ID:ENSP00000351052
Original member Current member NCBI NM_016478.5 NP_057562.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016478.5Link to Protein Sequence:NP_057562.3Re-query CCDS DB by Nucleotide ID:NM_016478Re-query CCDS DB by Protein ID:NP_057562Link to BLAST:NP_057562.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057562.3 502 Q86WB0-1 502 100% 0 0

Chromosomal Locations for CCDS 34753.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 130018664 130018732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130022319 130022525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130023511 130023723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130024263 130024506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130026158 130026312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130028902 130029029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130039464 130039547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130040951 130041101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130049033 130049144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130051221 130051366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1509 nt):
ATGGCGGCGCCCTGTGAGGGACAAGCGTTTGCCGTAGGGGTTGAAAAGAATTGGGGTGCAGTAGTTCGCT
CCCCAGAAGGGACCCCCCAGAAAATCCGGCAGCTGATAGATGAGGGGATTGCCCCGGAAGAGGGAGGCGT
GGACGCGAAGGACACGTCTGCCACATCCCAGTCAGTTAATGGATCACCCCAAGCGGAACAACCTTCATTG
GAATCTACAAGCAAAGAAGCCTTCTTTAGCAGAGTGGAAACATTTTCTTCTTTGAAATGGGCAGGTAAGC
CCTTTGAGCTGTCTCCACTCGTCTGTGCAAAATATGGCTGGGTCACAGTGGAATGTGATATGCTCAAGTG
CTCTAGCTGTCAAGCTTTTCTCTGTGCCAGTTTACAACCAGCTTTTGACTTTGACAGATATAAGCAACGA
TGTGCTGAGCTGAAGAAAGCCTTGTGTACTGCCCATGAGAAGTTCTGTTTCTGGCCAGACAGCCCATCCC
CAGACCGATTTGGGATGTTGCCCCTGGATGAGCCTGCTATTCTTGTTAGTGAATTCCTAGATCGTTTTCA
AAGCCTTTGTCACTTGGACCTCCAGCTTCCTTCCCTAAGGCCGGAGGACTTGAAAACTATGTGCTTGACA
GAAGACAAGATCAGTCTTCTCCTACACTTGCTTGAAGATGAACTTGATCACCGAACTGATGAGAGAAAAA
CTACAATCAAATTAGGCTCAGACATCCAAGTCCACGTCACTGCCTGTATTCTCTCTGTGTGTGGCTGGGC
GTGTAGTTCCTCTTTGGAATCCATGCAGCTCTCCCTGATAACATGTTCGCAATGTATGAGGAAGGTGGGG
CTCTGGGGCTTCCAGCAGATTGAATCGTCCATGACTGACCTGGATGCATCCTTTGGCCTGACCAGCTCCC
CAATCCCAGGCCTTGAGGGGCGACCAGAGCGCTTACCTCTGGTGCCTGAATCTCCTCGGAGGATGATGAC
CCGGAGCCAGGATGCCACTTTCTCCCCAGGCTCAGAGCAGGCTGAAAAGAGCCCTGGTCCCATTGTCTCT
CGAACTCGGAGCTGGGACTCTTCCAGTCCTGTTGACCGTCCTGAGCCAGAGGCTGCTAGCCCCACCACCA
GAACTCGCCCAGTGACCCGAAGCATGGGAACAGGAGACACCCCTGGCCTGGAGGTACCATCTAGCCCTCT
GCGGAAAGCCAAGCGAGCTCGCCTCTGCTCCTCCAGCAGTTCGGACACATCTTCCCGAAGCTTCTTTGAT
CCCACCTCTCAGCATAGAGACTGGTGCCCTTGGGTGAATATCACACTTGGCAAAGAAAGCAGGGAGAATG
GTGGAACTGAACCAGATGCCAGCGCCCCAGCAGAGCCAGGCTGGAAAGCAGTGCTGACCATCCTCTTGGC
GCACAAACAGTCTAGCCAGCCAGCTGAAACGGACTCCATGAGTCTCTCTGAGAAATCAAGGAAAGTATTC
CGAATATTTCGGCAGTGGGAATCTCTGTGCTCATGCTGA

Translation (502 aa):
MAAPCEGQAFAVGVEKNWGAVVRSPEGTPQKIRQLIDEGIAPEEGGVDAKDTSATSQSVNGSPQAEQPSL
ESTSKEAFFSRVETFSSLKWAGKPFELSPLVCAKYGWVTVECDMLKCSSCQAFLCASLQPAFDFDRYKQR
CAELKKALCTAHEKFCFWPDSPSPDRFGMLPLDEPAILVSEFLDRFQSLCHLDLQLPSLRPEDLKTMCLT
EDKISLLLHLLEDELDHRTDERKTTIKLGSDIQVHVTACILSVCGWACSSSLESMQLSLITCSQCMRKVG
LWGFQQIESSMTDLDASFGLTSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVS
RTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFFD
PTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKAVLTILLAHKQSSQPAETDSMSLSEKSRKVF
RIFRQWESLCSC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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