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Report for CCDS34746.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34746.1 Public Homo sapiens 7 FSCN3 24 110 108 CCDS HistoryNCBI Gene:29999Re-query CCDS DB by CCDS ID:34746.1Re-query CCDS DB by GeneID:29999See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34746.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265825.6 ENSP00000265825.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000265825.6Link to Ensembl Protein Viewer:ENSP00000265825.5Re-query CCDS DB by Nucleotide ID:ENST00000265825Re-query CCDS DB by Protein ID:ENSP00000265825
Original member Current member NCBI NM_020369.3 NP_065102.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020369.3Link to Protein Sequence:NP_065102.1Re-query CCDS DB by Nucleotide ID:NM_020369Re-query CCDS DB by Protein ID:NP_065102Link to BLAST:NP_065102.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065102.1 498 Q9NQT6-1 498 100% 0 0

Chromosomal Locations for CCDS 34746.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 127593854 127593997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127595307 127596003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127596328 127596446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127598435 127598594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127599381 127599551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127600194 127600399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1497 nt):
ATGGATGAGACAGAGTGGATACACAGACATCCCAAGGCTGAGGACCTAAGGGTTGGGCTCATCAGCTGGG
CAGGAACCTACCTCACCTTTGAGGCATGCAAGAATACAGTCACTGCAACTGCGAAGAGTTTGGGCAGGAG
ACAGACCTGGGAGATCTTGGTGAGCAATGAGCATGAGACACAGGCCGTGGTGCGACTAAAGAGCGTGCAG
GGCCTCTACCTGCTGTGTGAGTGTGATGGCACCGTGTGTTATGGCCGCCCAAGGACCAGCCACCATGGGT
GCTTTCTACTGCGTTTCCACCGGAACAGCAAGTGGACCCTCCAGTGCCTAATCTCTGGTCGTTATTTGGA
GTCCAATGGCAAGGACGTGTTTTGCACTTCCCACGTCCTCTCAGCTTACCACATGTGGACCCCCCGACCA
GCCCTCCATGTCCACGTGATCCTCTACAGCCCCATCCACCGCTGCTATGCCCGGGCTGACCCCACTATGG
GCCGCATCTGGGTGGACGCAGCAGTTCCCTGCCTGGAGGAGTGTGGCTTCCTGTTGCATTTCCGAGATGG
ATGCTACCACCTGGAGACCTCTACACACCACTTCTTGTCCCATGTAGACCGGCTGTTCTCCCAACCCTCA
TCACAGACAGCTTTTCACATGCAAGTGCGGCCTGGAGGGCTTGTGGCACTGTGTGATGGAGAAGGAGGCA
TGTTATATCCACAGGGCACGCATCTGCTCTTGGGCATGGGCTGCAACCCCATGAGGGGTGAGGAGTGGTT
CATCCTACAGCACTGCCCAACCTGGGTCAGCCTCAGGTCAAAGACTGGGCGGTTCATCTCAGTCATCTAC
GATGGTGAGGTGCGTGCTGCTTCTGAGCGCTTAAACCGAATGTCCTTGTTCCAGTTTGAATGTGACAGTG
AGAGCCCCACTGTGCAGCTTCGTTCAGCCAATGGCTACTACCTATCCCAGAGGCGCCACAGGGCAGTAAT
GGCTGATGGGCACCCCCTGGAGTCTGACACGTTCTTCCGAATGCACTGGAACTGTGGCAGGATCATCCTG
CAGTCCTGCAGGGGGCGCTTCCTGGGCATTGCACCCAACAGCCTGCTGATGGCCAATGTCATCCTTCCAG
GCCCAAATGAGGAATTTGGGATTTTATTTGCCAATCGCTCCTTCCTTGTATTGCGAGGTCGTTATGGCTA
TGTGGGCTCCTCATCGGGCCATGACCTCATACAGTGCAACCAGGATCAGCCCGACCGCATTCATCTACTA
CCCTGCCGACCGGGTATCTACCACTTCCAGGCACAGGGGGGATCCTTCTGGTCAATAACATCCTTTGGCA
CCTTTCGCCCTTGGGGCAAGTTTGCCCTCAACTTCTGTATCGAGCTTCAGGGGAGCAACTTACTCACTGT
ACTGGCCCCCAATGGCTTCTACATGCGAGCCGACCAAAGTGGCACCCTGTTGGCAGACAGTGAAGACATT
ACCAGAGAGTGTATCTGGGAATTTTAG

Translation (498 aa):
MDETEWIHRHPKAEDLRVGLISWAGTYLTFEACKNTVTATAKSLGRRQTWEILVSNEHETQAVVRLKSVQ
GLYLLCECDGTVCYGRPRTSHHGCFLLRFHRNSKWTLQCLISGRYLESNGKDVFCTSHVLSAYHMWTPRP
ALHVHVILYSPIHRCYARADPTMGRIWVDAAVPCLEECGFLLHFRDGCYHLETSTHHFLSHVDRLFSQPS
SQTAFHMQVRPGGLVALCDGEGGMLYPQGTHLLLGMGCNPMRGEEWFILQHCPTWVSLRSKTGRFISVIY
DGEVRAASERLNRMSLFQFECDSESPTVQLRSANGYYLSQRRHRAVMADGHPLESDTFFRMHWNCGRIIL
QSCRGRFLGIAPNSLLMANVILPGPNEEFGILFANRSFLVLRGRYGYVGSSSGHDLIQCNQDQPDRIHLL
PCRPGIYHFQAQGGSFWSITSFGTFRPWGKFALNFCIELQGSNLLTVLAPNGFYMRADQSGTLLADSEDI
TRECIWEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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