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Report for CCDS34715.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34715.1 Public Homo sapiens 7 LRWD1 24 110 108 CCDS HistoryNCBI Gene:222229Re-query CCDS DB by CCDS ID:34715.1Re-query CCDS DB by GeneID:222229See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34715.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000292616.10 ENSP00000292616.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000292616.10Link to Ensembl Protein Viewer:ENSP00000292616.5Re-query CCDS DB by Nucleotide ID:ENST00000292616Re-query CCDS DB by Protein ID:ENSP00000292616
Original member Current member NCBI NM_152892.3 NP_690852.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152892.3Link to Protein Sequence:NP_690852.1Re-query CCDS DB by Nucleotide ID:NM_152892Re-query CCDS DB by Protein ID:NP_690852Link to BLAST:NP_690852.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_690852.1 647 Q9UFC0 647 100% 0 0

Chromosomal Locations for CCDS 34715.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 102465081 102465160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102465817 102466051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102466154 102466270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102467339 102467479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102467719 102467823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102468062 102468187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102468263 102468377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102468554 102468654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102468855 102469062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102469574 102469646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102469742 102469882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102472218 102472309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102472454 102472609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102472692 102472804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102472909 102473049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1944 nt):
ATGGGCCCCCTCTCGGCGCGGCTGCTAATGCAGCGCGGGCGCCCCAAGAGCGACCGGCTGGGGAAGATCC
GGAGTCTGGACCTGTCAGGATTGGAGCTGCTTTCCGAGCACCTGGACCCCAAACTCCTGTGCCGCCTGAC
GCAGCTGCAGGAGCTTGACCTGTCTAACAACCACCTGGAGACGCTGCCGGACAACCTGGGCCTGTCCCAC
CTGCGTGTCCTCCGCTGCGCCAACAACCAGCTGGGGGATGTTACTGCCTTGTGCCAGTTCCCCAAGCTCG
AGGAACTCAGCCTGGAGGGCAACCCCTTCCTGACGGTCAATGACAACCTGAAAGTCTCCTTTCTCCTGCC
CACGCTCCGTAAGGTCAATGGCAAGGATGCGTCCTCAACTTACTCTCAGGTGGAGAACCTGAATCGGGAG
CTGACCAGCAGGGTCACAGCTCACTGGGAGAAGTTCATGGCCACACTGGGTCCTGAAGAGGAGGCTGAGA
AGGCCCAGGCGGACTTTGTGAAGTCGGCTGTCAGGGATGTCCGCTACGGGCCCGAGTCCCTCAGCGAGTT
CACCCAGTGGCGGGTGCGGATGATCTCTGAGGAGCTGGTGGCCGCCAGTAGGACCCAGGTGCAAAAGGCT
AACAGCCCAGAGAAGCCCCCAGAAGCTGGAGCTGCCCACAAGCCCAGGGCCAGACTGGCGGCCTTGAAAC
GGCCAGACGACGTCCCACTCAGCCTCTCTCCCAGCAAGCGGGCGTGTGCCTCCCCGTCGGCCCAGGTGGA
GGGCAGCCCTGTGGCAGGCTCCGATGGCAGCCAGCCTGCTGTGAAGCTGGAGCCCCTGCACTTCCTGCAG
TGCCACAGCAAGAACAACAGCCCCCAGGACCTCGAGACCCAGCTGTGGGCCTGTGCCTTCGAGCCGGCCT
GGGAGGAGGGGGCCACATCCCAGACCGTGGCCACGTGCGGCGGGGAGGCTGTGTGCGTAATTGATTGCCA
GACGGGCATCGTGCTCCACAAGTACAAGGCACCCGGCGAGGAGTTCTTTTCTGTGGCCTGGACCGCTCTG
ATGGTGGTCACACAGGCTGGCCACAAGAAGCGCTGGAGTGTGCTGGCGGCTGCAGGCCTACGGGGCCTGG
TCCGGCTGCTGCACGTGCGTGCCGGCTTCTGCTGCGGGGTCATCCGAGCCCACAAGAAGGCCATCGCCAC
CCTGTGCTTCAGCCCCGCCCACGAGACCCATCTCTTCACGGCCTCCTATGACAAGCGGATCATCCTCTGG
GACATCGGGGTGCCCAACCAGGACTACGAATTCCAGGCCAGCCAGCTGCTCACACTGGACACCACCTCTA
TCCCCCTGCGCCTCTGCCCTGTCGCCTCCTGCCCGGACGCCCGCCTGCTGGCCGGCTGCGAGGGCGGCTG
CTGCTGCTGGGACGTGCGGCTGGACCAGCCCCAAAAGAGGAGGGTGTGTGAAGTGGAATTCGTCTTCTCT
GAGGGCTCCGAGGCATCTGGACGGAGAGTGGATGGGCTGGCATTTGTGAATGAGGACATCGTGGCCTCCA
AGGGGAGCGGCCTGGGCACCATCTGCCTGTGGAGCTGGAGGCAGACGTGGGGGGGCCGGGGCAGCCAGTC
CACGGTGGCAGTGGTGGTCCTGGCGCGGCTGCAATGGTCGTCCACCGAGTTGGCCTACTTCTCGCTCAGC
GCCTGCCCTGATAAGGGGATTGTGCTCTGTGGGGATGAGGAGGGCAACGTGTGGCTCTACGACGTCAGCA
ACATCCTGAAGCAGCCACCCCTGCTGCCGGCAGCCCTGCAGGCCCCCACACAGATCCTGAAGTGGCCCCA
GCCCTGGGCCCTTGGCCAGGTGGTGACCAAGACCATGGTGAACACAGTGGTGGCCAATGCCTCCTTCACC
TACCTCACCGCCCTGACGGACTCCAACATCGTAGCCATCTGGGGGAGGATGTAG

Translation (647 aa):
MGPLSARLLMQRGRPKSDRLGKIRSLDLSGLELLSEHLDPKLLCRLTQLQELDLSNNHLETLPDNLGLSH
LRVLRCANNQLGDVTALCQFPKLEELSLEGNPFLTVNDNLKVSFLLPTLRKVNGKDASSTYSQVENLNRE
LTSRVTAHWEKFMATLGPEEEAEKAQADFVKSAVRDVRYGPESLSEFTQWRVRMISEELVAASRTQVQKA
NSPEKPPEAGAAHKPRARLAALKRPDDVPLSLSPSKRACASPSAQVEGSPVAGSDGSQPAVKLEPLHFLQ
CHSKNNSPQDLETQLWACAFEPAWEEGATSQTVATCGGEAVCVIDCQTGIVLHKYKAPGEEFFSVAWTAL
MVVTQAGHKKRWSVLAAAGLRGLVRLLHVRAGFCCGVIRAHKKAIATLCFSPAHETHLFTASYDKRIILW
DIGVPNQDYEFQASQLLTLDTTSIPLRLCPVASCPDARLLAGCEGGCCCWDVRLDQPQKRRVCEVEFVFS
EGSEASGRRVDGLAFVNEDIVASKGSGLGTICLWSWRQTWGGRGSQSTVAVVVLARLQWSSTELAYFSLS
ACPDKGIVLCGDEEGNVWLYDVSNILKQPPLLPAALQAPTQILKWPQPWALGQVVTKTMVNTVVANASFT
YLTALTDSNIVAIWGRM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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