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Report for CCDS3467.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3467.1 Public Homo sapiens 4 KCTD8 24 110 108 CCDS HistoryNCBI Gene:386617Re-query CCDS DB by CCDS ID:3467.1Re-query CCDS DB by GeneID:386617See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3467.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360029.4 ENSP00000353129.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360029.4Link to Ensembl Protein Viewer:ENSP00000353129.3Re-query CCDS DB by Nucleotide ID:ENST00000360029Re-query CCDS DB by Protein ID:ENSP00000353129
Original member Current member NCBI NM_198353.3 NP_938167.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198353.3Link to Protein Sequence:NP_938167.1Re-query CCDS DB by Nucleotide ID:NM_198353Re-query CCDS DB by Protein ID:NP_938167Link to BLAST:NP_938167.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_938167.1 473 Q6ZWB6 473 100% 0 0

Chromosomal Locations for CCDS 3467.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 44174790 44175250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44447563 44448523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1422 nt):
ATGGCTCTGAAGGACACGGGCAGCGGCGGCAGCACCATCCTGCCCATTAGCGAGATGGTTTCCTCGTCCA
GCTCGCCCGGCGCGTCGGCCGCCGCCGCCCCGGGGCCCTGCGCACCCTCGCCCTTCCCTGAAGTAGTGGA
GCTGAACGTAGGCGGCCAGGTTTATGTGACCAAGCACTCGACGCTGCTCAGCGTCCCGGACAGTACTTTG
GCCAGCATGTTCTCGCCCTCTAGTCCCCGTGGCGGCGCCCGGCGCCGGGGCGAGCTGCCCAGGGACAGCC
GGGCGCGCTTCTTCATCGACCGGGACGGCTTCCTTTTCAGGTACGTGCTGGATTATCTGCGGGACAAGCA
ACTCGCGCTGCCGGAGCACTTCCCCGAGAAGGAGCGGCTGCTGCGCGAGGCCGAGTATTTCCAGCTCACC
GACTTGGTCAAGCTGCTGTCGCCCAAGGTCACCAAGCAGAACTCTCTCAACGACGAGGGCTGCCAGAGCG
ACCTGGAGGACAACGTCTCGCAGGGTAGCAGCGACGCGCTGCTGCTGCGCGGGGCGGCGGCCGCCGTGCC
CTCGGGCCCGGGAGCGCACGGTGGTGGCGGCGGCGGCGGCGCGCAGGACAAGCGCTCGGGCTTCCTCACG
CTGGGCTACCGGGGCTCCTACACCACCGTGCGCGACAACCAGGCCGACGCCAAATTCCGGCGTGTGGCGC
GCATCATGGTGTGCGGGCGCATCGCGCTGGCCAAGGAGGTCTTCGGGGACACGCTCAACGAGAGCCGCGA
CCCCGACCGGCAGCCGGAGAAGTACACGTCCCGCTTCTACCTCAAGTTCACCTACTTGGAGCAGGCCTTT
GATCGCCTGTCCGAGGCCGGCTTCCACATGGTGGCGTGTAACTCCTCGGGCACCGCCGCCTTCGTCAACC
AGTACCGCGACGACAAGATCTGGAGCAGCTACACCGAGTACATTTTCTTCCGACCACCTCAGAAAATAGT
ATCACCTAAACAAGAACATGAAGATAGGAAACATGACAAAGTCACTGATAAAGGAAGTGAAAGTGGGACT
TCCTGTAATGAGCTCTCCACTTCCAGTTGTGACAGCCATTCAGAGGCAAGCACTCCCCAGGACAACCCAT
CCAGTGCCCAGCAGGCAACAGCTCACCAACCTAACACTTTAACATTGGATCGCCCCTCTAAAAAAGCACC
TGTACAATGGATACCCCCACCAGACAAACGCAGAAACAGTGAACTCTTTCAGACCCTCATCAGCAAGTCC
CGGGAAACAAATCTGTCCAAAAAGAAAGTCTGTGAGAAGCTAAGTGTGGAAGAAGAAATGAAAAAGTGTA
TTCAGGATTTTAAAAAAATCCACATTCCAGATTATTTTCCAGAGCGCAAACGCCAATGGCAATCTGAACT
GTTGCAGAAGTATGGGTTATAG

Translation (473 aa):
MALKDTGSGGSTILPISEMVSSSSSPGASAAAAPGPCAPSPFPEVVELNVGGQVYVTKHSTLLSVPDSTL
ASMFSPSSPRGGARRRGELPRDSRARFFIDRDGFLFRYVLDYLRDKQLALPEHFPEKERLLREAEYFQLT
DLVKLLSPKVTKQNSLNDEGCQSDLEDNVSQGSSDALLLRGAAAAVPSGPGAHGGGGGGGAQDKRSGFLT
LGYRGSYTTVRDNQADAKFRRVARIMVCGRIALAKEVFGDTLNESRDPDRQPEKYTSRFYLKFTYLEQAF
DRLSEAGFHMVACNSSGTAAFVNQYRDDKIWSSYTEYIFFRPPQKIVSPKQEHEDRKHDKVTDKGSESGT
SCNELSTSSCDSHSEASTPQDNPSSAQQATAHQPNTLTLDRPSKKAPVQWIPPPDKRRNSELFQTLISKS
RETNLSKKKVCEKLSVEEEMKKCIQDFKKIHIPDYFPERKRQWQSELLQKYGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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