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Report for CCDS34637.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34637.1 Public Homo sapiens 7 COBL 24 110 108 CCDS HistoryNCBI Gene:23242Re-query CCDS DB by CCDS ID:34637.1Re-query CCDS DB by GeneID:23242See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34637.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265136.12 ENSP00000265136.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000265136.12Link to Ensembl Protein Viewer:ENSP00000265136.7Re-query CCDS DB by Nucleotide ID:ENST00000265136Re-query CCDS DB by Protein ID:ENSP00000265136
Original member Current member NCBI NM_015198.5 NP_056013.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015198.5Link to Protein Sequence:NP_056013.2Re-query CCDS DB by Nucleotide ID:NM_015198Re-query CCDS DB by Protein ID:NP_056013Link to BLAST:NP_056013.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056013.2 1261 O75128-1 1261 100% 0 0

Chromosomal Locations for CCDS 34637.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 51017551 51017568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51025109 51025372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51026546 51026665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51027712 51029591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51030812 51030909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51043383 51043692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51085166 51085304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51136158 51136331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51184102 51184199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51190850 51191078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51193379 51193589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51219741 51219944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51316593 51316633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3786 nt):
ATGGACGCGCCGCGCGCCTCGGCGGCCAAGCCCCCGACCGGGAGGAAGATGAAGGCTCGTGCTCCCCCAC
CTCCTGGAAAGGCTGCCACTCTGCATGTGCACAGTGACCAGAAGCCCCCCCACGATGGGGCCCTCGGGTC
GCAGCAGAACTTGGTTCGCATGAAGGAGGCGCTGAGGGCCAGCACCATGGACGTCACCGTGGTCCTGCCT
AGTGGGCTGGAGAAGAGGAGCGTGCTCAATGGGAGCCATGCGATGATGGACCTACTGGTTGAACTTTGCC
TTCAGAACCACCTGAATCCATCCCACCATGCCCTTGAAATTCGGTCTTCAGAAACCCAACAACCTTTGAG
TTTTAAGCCAAATACTTTGATTGGGACCCTGAATGTGCATACTGTGTTTCTGAAAGAAAAAGTTCCTGAA
GAGAAGGTTAAGCCTGGTCCCCCTAAGGTGCCTGAGAAATCTGTGCGTTTGGTCGTGAATTACCTGCGGA
CACAAAAAGCTGTTGTGCGTGTGAGCCCTGAGGTTCCTCTCCAGAATATTCTCCCAGTCATTTGTGCAAA
GTGTGAGGTCAGCCCAGAGCACGTGGTTCTCCTCAGGGACAACATTGCCGGAGAGGAGCTGGAGCTGTCC
AAGTCCCTGAACGAGCTCGGGATAAAGGAGCTCTACGCGTGGGACAACAGAAGAGAAACCTTTAGGAAAT
CATCACTTGGCAATGATGAGACAGATAAAGAGAAGAAAAAATTTCTGGGATTTTTCAAAGTTAATAAAAG
AAGCAATAGTAAGGGCTGTTTAACGACCCCCAACTCCCCATCCATGCACTCACGTTCTCTTACGCTGGGT
CCATCCCTCTCGCTGGGCAGCATCTCAGGGGTGTCCGTGAAGTCGGAGATGAAGAAGCGCCGAGCCCCTC
CTCCTCCAGGTTCAGGGCCACCTGTGCAAGACAAGGCATCGGAAAAGGTATCTCTTGGGTCACAGATTGA
TTTACAGAAGAAGAAGCGGCGAGCGCCAGCTCCCCCTCCACCACAGCCACCACCACCGAGTCCCCTGATC
CCCAACCGCACTGAGGATAAGGAGGAGAACAGGAAGAGCACGATGGTAAGCCTGCCCCTGGGGTCTGGCA
GCCACTGCAGCCCGGATGGAGCCCCGCAGGTGCTGTCAGAGGCGGAGGAGACCGTGTCAGTTGGCAGCTG
TTTTGCGTCGGAGGACACGACCGAGGACTCAGGAGTGATGAGTTCCCCCTCAGACATCGTCTCTCTGGAC
TCGCAGCAGGACAGCATGAAATACAAAGACAAGTGGGCCACAGACCAGGAAGACTGCAGTGACCAGGACC
TCGCTGGAACCCCAGACCTGGGTCCCCAGAAGAGCCCCTTGTGGGAGAAGAATGGCTCTGAGAACTCACA
TCTGAGAACTGAAAAAGCTGTCACAGCCTCAAATGATGAAGAAGACCTATTAATTGCTGGAGAGTTCCGT
AAAACCCTTGCAGAACTTGATGAAGACCTGGAAGAAATGGAAGACAGCTATGAAACAGACACCAGCTCCC
TCACCAGCTCCATCCATGGTGCATCCAACCACTGCCCACAGGATGCCATGATCCCTCACGGCGACACAGA
TGCAATCCCAGTAACATTCATAGGGGAAGTTTCAGATGATCCTGTGGATTCGGGGTTGTTTTCCAATAGA
AACAACAATGCTGGGTCTTTCGACTCGGAGGGTGTTGCCAGCAGGAGAGACTCCCTGGCGCCACTTCAAG
CTGAGCACAGCCAGCCCCATGAAAAGGCAAGGGAGGAAGTACCTGCCCTGCACCCCGCTTCCCATGACGT
CGGAAAAGGAATCCGTGTGGCCTTATCTAACATCTCTAAAGATGGGAATCTAATGGAAACGGCGCCCAGG
GTGACTTCTTTTGCTTCGAATCTTCACACAGACAACCTAAATGCAAAAGTGAAAGACAAAGTGTATGGCT
GTGCTGACGGGGAGAGGACTCAAGCCACAGAGAGAGTGAATTCCCAACCGGTGAATGAAAAGGACAGCAA
CGATAAAAACGCTGCCTTGGCACCAACATCATGGCACCAACGAGGCCAAAACCCAGGGAAAAGCTACAGA
CTTAAGCACGGCCTCACAACGTATAAAATCATTCCTCCAAAGTCAGAGATGCGATGTTACGACAGAGATG
TGTCCCTCTCCACCGGAGCCATTAAGATTGACGAGCTGGGGAACTTGGTGAGTCCTCACGCCACCGGCAT
CAGGATCATTTCCCTGTCTTCGTCTGTGCCTGAAGCAGAATCTCAGCCCATTGGGAAAGTCAGAGAGTTC
TGGAGGTGCAACTCTGTGGAAAAACACCTGGGCCGACCCTCAGAGAGCTCTGCCAGGGGACCCCCCTCCA
CCCCTGTGCCCACGCAGACGCAGAATCCAGAGAGCAGACTCCAAGCAGACCCCAAGCCAATATCGCCCCA
GCAGAAGTCTGCCCACCATGAGGGCCGGAACCCCCTAGGGGAGGGGAGAAACCAGCCCCCCACCATGGGC
ATGGGTCACGTGAGGGTGCCAGCAGCTCACACCACAGAAGTCACATTTCTCAAGCCTCAGAGAAGAACGT
CCAGCCAGTATGTGGCCTCTGCCATTGCCAAGCGCATAGGAGCCCCAAAAGTCCATGCTGATGTGGTGAG
GCCACACGGTTATGCCGAGAAGGGTTATGCAGGCAAGGCGCCAGTGCTGGCTGCACCACCTGTCACTGTG
AAAGATGACAGGACATCCAGCCCACACTCAGAGACACAAGGATGGAAGGATGGTGCCCAGTGGCCCTGTG
TCACTCCTCCCAACAACCACGGGGAAGATTTGGCAGTGGGAGCCCCTCCTAGGGGGGAGGTCATTGGCCC
ACACAGGAAGTTGTCTACTCAGGACAGACCTGCTGCTATCCACAGAAGCTCCTGTTTCTCACTGGTTCAG
TCTTCCCAGAGGGATCGTGTTTCTGTGGGACAGAGCTGTGGTTTCAGTGGAAAGCAAAGCACAAGTAGCC
AGGAGGCCAGCTCAGCATCTGAGCCCAGACGCGCACCTGATGGTACAGACCCACCCCCTCCACACACATC
TGACACTCAGGCCTGCAGCAGGGAGCTGGTCAATGGCTCTGTGCGCGCCCCAGGCCACGGCGAGCCTTCC
CACCCTCCAGGAGGGTCTGGCACAGAAAGCCACATTCTCCTAGAAAGAGAGGAAAAGCCCAGTGTGTTCT
CTACAGATGGAAATGAAACAGACAGTATTTGGCCACCCAGCATTTTTGGGCCGAAGAAAAAATTCAAACC
TGTTGTCCAGAGACCAGTCCCAAAAGACACATCCCTGCACTCTGCCCTGATGGAAGCCATCCACTCTGCG
GGAGGGAAGGACAGACTACGCAAGACGGCAGAACACACCGGGGAGGGCAGGCCAGCGAAACTGTCCTACA
CGGAGGCAGAGGGCGAACGATCTGCACTGCTGGCAGCTATCCGCGGGCACAGCGGCACCTGCAGCCTGAG
GAAGGTGGCATCCTCTGCTTCTGAGGAGCTCCAGAGCTTCCGAGATGCCGCACTCTCTGCTCAGGGCTCG
GAAAGTCCTCTGCTAGAAGACCTTGGTCTTCTGTCCCCACCAGCCATTCCCCCACCACCCCCTCCACCCT
CCCAGGCTCTCTCTGCACCAAGGACGGCCTCCAGGTTCAGCACGGGCACCCTCAGCAACACCGCAGACGC
AAGGCAAGCCTTGATGGACGCCATCCGCTCCGGCACAGGGGCTGCGAGACTGAGAAAGGTGCCCTTGCTC
GTGTGA

Translation (1261 aa):
MDAPRASAAKPPTGRKMKARAPPPPGKAATLHVHSDQKPPHDGALGSQQNLVRMKEALRASTMDVTVVLP
SGLEKRSVLNGSHAMMDLLVELCLQNHLNPSHHALEIRSSETQQPLSFKPNTLIGTLNVHTVFLKEKVPE
EKVKPGPPKVPEKSVRLVVNYLRTQKAVVRVSPEVPLQNILPVICAKCEVSPEHVVLLRDNIAGEELELS
KSLNELGIKELYAWDNRRETFRKSSLGNDETDKEKKKFLGFFKVNKRSNSKGCLTTPNSPSMHSRSLTLG
PSLSLGSISGVSVKSEMKKRRAPPPPGSGPPVQDKASEKVSLGSQIDLQKKKRRAPAPPPPQPPPPSPLI
PNRTEDKEENRKSTMVSLPLGSGSHCSPDGAPQVLSEAEETVSVGSCFASEDTTEDSGVMSSPSDIVSLD
SQQDSMKYKDKWATDQEDCSDQDLAGTPDLGPQKSPLWEKNGSENSHLRTEKAVTASNDEEDLLIAGEFR
KTLAELDEDLEEMEDSYETDTSSLTSSIHGASNHCPQDAMIPHGDTDAIPVTFIGEVSDDPVDSGLFSNR
NNNAGSFDSEGVASRRDSLAPLQAEHSQPHEKAREEVPALHPASHDVGKGIRVALSNISKDGNLMETAPR
VTSFASNLHTDNLNAKVKDKVYGCADGERTQATERVNSQPVNEKDSNDKNAALAPTSWHQRGQNPGKSYR
LKHGLTTYKIIPPKSEMRCYDRDVSLSTGAIKIDELGNLVSPHATGIRIISLSSSVPEAESQPIGKVREF
WRCNSVEKHLGRPSESSARGPPSTPVPTQTQNPESRLQADPKPISPQQKSAHHEGRNPLGEGRNQPPTMG
MGHVRVPAAHTTEVTFLKPQRRTSSQYVASAIAKRIGAPKVHADVVRPHGYAEKGYAGKAPVLAAPPVTV
KDDRTSSPHSETQGWKDGAQWPCVTPPNNHGEDLAVGAPPRGEVIGPHRKLSTQDRPAAIHRSSCFSLVQ
SSQRDRVSVGQSCGFSGKQSTSSQEASSASEPRRAPDGTDPPPPHTSDTQACSRELVNGSVRAPGHGEPS
HPPGGSGTESHILLEREEKPSVFSTDGNETDSIWPPSIFGPKKKFKPVVQRPVPKDTSLHSALMEAIHSA
GGKDRLRKTAEHTGEGRPAKLSYTEAEGERSALLAAIRGHSGTCSLRKVASSASEELQSFRDAALSAQGS
ESPLLEDLGLLSPPAIPPPPPPPSQALSAPRTASRFSTGTLSNTADARQALMDAIRSGTGAARLRKVPLL
V


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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