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Report for CCDS34235.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34235.1 Public Homo sapiens 5 KIF3A 24 110 108 CCDS HistoryNCBI Gene:11127Re-query CCDS DB by CCDS ID:34235.1Re-query CCDS DB by GeneID:11127See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34235.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378746.8 ENSP00000368020.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378746.8Link to Ensembl Protein Viewer:ENSP00000368020.3Re-query CCDS DB by Nucleotide ID:ENST00000378746Re-query CCDS DB by Protein ID:ENSP00000368020
Original member Current member NCBI NM_007054.7 NP_008985.3 Accepted alive Link to Nucleotide Sequence:NM_007054.7Link to Protein Sequence:NP_008985.3Re-query CCDS DB by Nucleotide ID:NM_007054Re-query CCDS DB by Protein ID:NP_008985Link to BLAST:NP_008985.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008985.3 699 Q9Y496 699 100% 0 0

Chromosomal Locations for CCDS 34235.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 132696634 132696682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132699171 132699295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132700216 132700284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132700647 132700700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132702087 132702212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132702558 132702668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132702885 132703065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132703463 132703619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132710959 132711057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132715757 132715931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132716245 132716442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132716845 132716984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132720609 132720714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132726128 132726212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132726354 132726498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132734205 132734478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132737414 132737419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2100 nt):
ATGCCGATCAATAAATCAGAGAAGCCAGAAAGCTGCGATAATGTGAAGGTTGTTGTTAGGTGCCGGCCCC
TCAATGAGAGAGAGAAATCAATGTGCTACAAACAGGCTGTCAGTGTGGATGAGATGAGGGGAACTATCAC
TGTACATAAGACTGATTCTTCCAATGAACCTCCAAAGACATTTACTTTTGATACTGTTTTTGGACCAGAG
AGTAAACAACTTGATGTTTATAACTTAACTGCAAGACCTATTATTGATTCTGTACTTGAAGGCTACAATG
GGACTATTTTTGCATATGGACAAACCGGAACAGGCAAAACTTTTACCATGGAAGGTGTTCGAGCTATTCC
TGAACTTAGAGGAATAATTCCCAATTCATTTGCTCACATATTTGGTCATATTGCAAAAGCGGAGGGTGAT
ACAAGATTTTTGGTTCGAGTGTCTTATTTGGAAATATATAATGAAGAAGTTCGTGACCTTTTGGGCAAGG
ATCAGACACAAAGGTTAGAGGTTAAAGAAAGACCTGATGTGGGAGTTTATATCAAAGATTTATCAGCTTA
TGTGGTAAATAATGCTGATGATATGGATAGAATTATGACGCTAGGCCACAAAAATCGTTCTGTTGGTGCA
ACTAATATGAACGAACATAGTTCCCGTTCCCATGCCATCTTTACAATTACTATAGAATGCAGTGAAAAAG
GCATTGATGGTAACATGCATGTCAGGATGGGGAAGCTCCATCTTGTAGATCTTGCTGGTTCAGAAAGACA
GGCAAAAACTGGAGCTACTGGACAGCGCCTAAAGGAAGCTACAAAAATCAATCTTTCACTTTCCACCCTT
GGTAATGTAATTTCTGCCTTGGTTGATGGAAAAAGCACTCATGTGCCTTATCGTAACTCTAAACTGACTC
GTCTTCTTCAGGATTCCTTAGGAGGAAATTCAAAAACCATGATGTGTGCAAATATTGGGCCAGCAGATTA
CAATTATGATGAAACTATCAGTACATTACGGTATGCCAATCGTGCTAAGAATATTAAAAATAAAGCTAGA
ATTAATGAAGATCCAAAGGATGCTTTGCTGCGTCAGTTCCAGAAAGAAATAGAAGAACTGAAAAAGAAGC
TTGAAGAAGGAGAAGAAATATCAGGCTCTGATATCAGTGGGTCAGAGGAAGATGATGATGAAGAGGGTGA
GGTTGGAGAAGATGGAGAGAAAAGGAAAAAAAGAAGGGGAAAAAAGAAAGTCTCCCCAGACAAGATGATT
GAAATGCAAGCAAAAATTGATGAGGAGAGAAAAGCACTTGAAACAAAGCTCGACATGGAAGAAGAAGAAA
GAAACAAGGCTAGAGCTGAATTAGAGAAACGGGAAAAAGATCTTCTTAAAGCCCAACAAGAGCATCAGTC
TTTGCTGGAAAAATTATCTGCCCTGGAAAAGAAGGTAATTGTTGGTGGGGTTGACTTGTTGGCCAAAGCT
GAGGAACAAGAGAAACTTCTTGAAGAATCTAACATGGAACTGGAAGAAAGGAGGAAAAGAGCAGAGCAAC
TTCGCAGAGAACTTGAGGAAAAAGAGCAAGAACGCTTGGATATTGAAGAAAAATATACCAGTTTGCAAGA
GGAAGCACAGGGAAAGACCAAGAAGTTAAAGAAAGTTTGGACTATGCTGATGGCTGCAAAGTCAGAGATG
GCTGATCTCCAACAAGAACATCAGAGGGAAATTGAAGGCCTACTGGAGAACATTCGGCAACTTAGCCGGG
AGCTTCGACTTCAGATGCTTATTATTGATAACTTTATACCTCGGGATTATCAGGAAATGATTGAAAACTA
TGTCCATTGGAATGAAGACATAGGAGAATGGCAGCTAAAATGTGTTGCTTATACAGGAAATAACATGAGG
AAGCAAACCCCAGTACCTGATAAAAAGGAGAAAGATCCCTTTGAGGTGGACCTTTCTCACGTGTATCTTG
CCTATACTGAGGAGAGTCTGCGTCAGTCTTTGATGAAACTAGAAAGACCACGAACTTCAAAGGGGAAAGC
AAGGCCAAAGACAGGGAGAAGAAAGCGTTCTGCAAAGCCTGAAACTGTAATTGACTCTTTACTGCAGTAA

Translation (699 aa):
MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPE
SKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAIPELRGIIPNSFAHIFGHIAKAEGD
TRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGA
TNMNEHSSRSHAIFTITIECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTL
GNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKAR
INEDPKDALLRQFQKEIEELKKKLEEGEEISGSDISGSEEDDDEEGEVGEDGEKRKKRRGKKKVSPDKMI
EMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKA
EEQEKLLEESNMELEERRKRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEM
ADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPRDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMR
KQTPVPDKKEKDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKTGRRKRSAKPETVIDSLLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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