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Report for CCDS34216.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34216.1 Public Homo sapiens 5 DTWD2 24 110 108 CCDS HistoryNCBI Gene:285605Re-query CCDS DB by CCDS ID:34216.1Re-query CCDS DB by GeneID:285605See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34216.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000510708.6 ENSP00000425048.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000510708.6Link to Ensembl Protein Viewer:ENSP00000425048.1Re-query CCDS DB by Nucleotide ID:ENST00000510708Re-query CCDS DB by Protein ID:ENSP00000425048
Original member Current member NCBI NM_173666.4 NP_775937.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173666.4Link to Protein Sequence:NP_775937.1Re-query CCDS DB by Nucleotide ID:NM_173666Re-query CCDS DB by Protein ID:NP_775937Link to BLAST:NP_775937.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775937.1 298 Q8NBA8-1 298 100% 0 0

Chromosomal Locations for CCDS 34216.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 118840917 118841087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 118848090 118848218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 118928537 118928729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 118939196 118939290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 118944559 118944649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 118988294 118988511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (897 nt):
ATGGAGTCGCAGAAAGAGGCACGAACACTCCAGGAGCCCGTTGCGCGGCCTTCTGGGGCCTCAAGCTCTC
AGACGCCGAACGACAAGGAGCGGCGGGAGGGCGGCGCAGTGCCGGCGGCGGCTGCCCTGGGCGCAGAGGC
GGACGACGACAGTGCGGACGGGCTGTGGGAGCTGCCGGTGGAGCCGGCCGAGCGGAGGCCTGAGTGCACC
CGCTGCAGCCGGCCTCAGAAAGTGTGTTTGTGTCCATTTCTCCCAGCGCACCCTCTGCATATCTCTACCC
ACTTGTACATAATTCAGCATCCAGCAGAGGAAAACAAAGTGTTGCGTACAGTTCCTCTACTAGCAGCATG
CCTCCCCCAGGACAAGTGTAAAGTGAAGATCGGTCGTCGCTTCAGTGAAGAAAGAGATCCTGAACTTTCA
ACTGTTTGCCGGAAGTCTGGTACATTAATATTATATCCAGGGGCTGAAGCTGCTAATTTGGAAGAATTTA
TATTAGATTCTCCTGTTTATCCTTCTACAATCATCATCATTGATGGTACATGGAGCCAGGCTAAGGACAT
TTTCTATAAGAACTCCTTGTTCCGACATCCCAAACAGGTGCAATTAAAAACTAGCATTTCTAGTCAGTAT
GTAATTCGGATGCAGCCGACTAATAGATGCCTTTCTACACTGGAGTGTGCAGCTGTTGCTCTTTCCATCT
TGGAGAAAAATAATTACATACAAGAGACTTTGCTTCGCCCTCTTCAAGCTTTATGCTCCTTTCAACTTCA
GCATGGTGCCCAAATTCGCCTCAGCAAGGAACACCTTCTGAAAAATGGATTATATCCTAAACCAATGCCA
AAGAACAAACGCAAACTCAGGAAAATGGAATTGTTAATGAATAGTGTTAAAATTTAG

Translation (298 aa):
MESQKEARTLQEPVARPSGASSSQTPNDKERREGGAVPAAAALGAEADDDSADGLWELPVEPAERRPECT
RCSRPQKVCLCPFLPAHPLHISTHLYIIQHPAEENKVLRTVPLLAACLPQDKCKVKIGRRFSEERDPELS
TVCRKSGTLILYPGAEAANLEEFILDSPVYPSTIIIIDGTWSQAKDIFYKNSLFRHPKQVQLKTSISSQY
VIRMQPTNRCLSTLECAAVALSILEKNNYIQETLLRPLQALCSFQLQHGAQIRLSKEHLLKNGLYPKPMP
KNKRKLRKMELLMNSVKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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