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Report for CCDS33672.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33672.1 Public Homo sapiens 22 GRAMD4 24 110 108 CCDS HistoryNCBI Gene:23151Re-query CCDS DB by CCDS ID:33672.1Re-query CCDS DB by GeneID:23151See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33672.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361034.7 ENSP00000354313.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361034.7Link to Ensembl Protein Viewer:ENSP00000354313.3Re-query CCDS DB by Nucleotide ID:ENST00000361034Re-query CCDS DB by Protein ID:ENSP00000354313
Original member Current member EBI ENST00000406902.6 ENSP00000385689.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000406902.6Link to Ensembl Protein Viewer:ENSP00000385689.1Re-query CCDS DB by Nucleotide ID:ENST00000406902Re-query CCDS DB by Protein ID:ENSP00000385689
Original member Current member NCBI NM_015124.5 NP_055939.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015124.5Link to Protein Sequence:NP_055939.1Re-query CCDS DB by Nucleotide ID:NM_015124Re-query CCDS DB by Protein ID:NP_055939Link to BLAST:NP_055939.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055939.1 578 Q6IC98-1 578 100% 0 0

Chromosomal Locations for CCDS 33672.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 46626800 46626961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46637840 46637960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46658187 46658307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46661381 46661442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46663040 46663172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46663838 46663863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46664026 46664117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46665615 46665706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46666825 46666873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46668096 46668167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46668689 46668732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46668799 46668908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46672843 46672997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46673670 46673814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46674657 46674750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46675468 46675552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46676600 46676668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 46677147 46677251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1737 nt):
ATGCTAAGGAGGTTGGACAAAATCAGGTTCAGAGGTCACAAGAGAGATGACTTCCTCGATCTAGCGGAGT
CTCCAAATGCCTCGGACACCGAATGCAGCGACGAAATCCCCCTGAAGGTACCGCGGACCTCGCCCCGGGA
CAGCGAGGAGCTGAGGGACCCTGCTGGTCCAGGGACCCTCATCATGGCCACAGGAGTCCAGGACTTTAAC
CGGACAGAGTTTGATCGACTGAATGAGATCAAAGGTCACCTGGAAATTGCCTTATTGGAAAAACATTTCT
TACAGGAGGAGCTCCGGAAGCTGCGAGAAGAAACCAACGCGGAGATGCTGCGGCAGGAGCTGGACCGCGA
GCGGCAGCGGCGGATGGAGCTGGAGCAGAAGGTGCAGGAGGTGCTGAAGGCCAGAACCGAGGAGCAGATG
GCTCAGCAGCCCCCAAAAGGGCAGGCCCAGGCCAGCAATGGAGCAGAGCGCCGGAGCCAGGGGCTGTCCT
CGCGCCTGCAGAAGTGGTTCTACGAGCGGTTTGGGGAGTACGTGGAGGACTTCCGGTTCCAGCCCGAGGA
GAACACTGTGGAGACAGAGGAACCCCTGAGCGCCCGCAGGTTAACTGAAAATATGAGACGGCTCAAGCGC
GGTGCCAAGCCGGTCACTAACTTTGTGAAGAACCTCTCTGCCTTATCCGACTGGTACTCCGTCTACACGT
CTGCCATTGCCTTCACCGTGTACATGAATGCCGTGTGGCATGGCTGGGCCATCCCATTGTTCTTATTTCT
AGCAATTCTGAGGTTATCCCTCAATTACCTCATCGCCAGGGGGTGGCGGATACAGTGGAGCATCGTGCCC
GAAGTGTCTGAGCCCGTGGAACCTCCAAAGGAAGACCTGACTGTGTCTGAGAAGTTCCAGCTGGTGCTGG
ACGTCGCCCAGAAAGCCCAGAACCTTTTCGGGAAGATGGCTGACATCCTGGAGAAGATCAAGAACTTGTT
CATGTGGGTCCAGCCGGAGATCACACAGAAGCTGTATGTGGCGCTCTGGGCTGCCTTCCTGGCCTCCTGC
TTCTTCCCCTACCGCCTGGTGGGGCTTGCCGTGGGACTCTATGCTGGTATCAAGTTCTTCCTCATTGATT
TCATCTTTAAACGCTGCCCGAGGCTGCGCGCCAAGTACGACACGCCCTATATCATCTGGAGGAGTCTCCC
CACCGACCCGCAGCTCAAGGAGCGCTCCAGCGCCGCAGTCTCACGCAGGCTGCAGACGACCTCGTCACGG
AGCTACGTACCCAGCGCACCGGCCGGCCTGGGTAAAGAGGAGGACGCCGGTCGCTTCCACAGCACCAAGA
AGGGCAATTTCCACGAGATCTTCAATCTGACAGAAAACGAGCGTCCGCTGGCGGTGTGCGAGAATGGCTG
GCGCTGCTGCCTCATCAACAGGGACCGGAAGATGCCCACGGACTACATCAGGAACGGGGTGCTCTACGTC
ACGGAGAATTACTTGTGCTTCGAAAGCTCCAAATCTGGGTCCTCAAAGAGGAACAAAGTCATCAAGCTAG
TGGACATCACGGACATCCAGAAGTACAAGGTCCTGTCTGTCCTCCCAGGCTCAGGCATGGGGATTGCCGT
GTCGACGCCATCCACCCAGAAACCGCTCGTGTTTGGTGCCATGGTGCACAGGGATGAGGCCTTCGAGACC
ATTCTCAGCCAGTACATCAAGATCACCTCAGCGGCAGCGTCTGGCGGGGACAGCTAG

Translation (578 aa):
MLRRLDKIRFRGHKRDDFLDLAESPNASDTECSDEIPLKVPRTSPRDSEELRDPAGPGTLIMATGVQDFN
RTEFDRLNEIKGHLEIALLEKHFLQEELRKLREETNAEMLRQELDRERQRRMELEQKVQEVLKARTEEQM
AQQPPKGQAQASNGAERRSQGLSSRLQKWFYERFGEYVEDFRFQPEENTVETEEPLSARRLTENMRRLKR
GAKPVTNFVKNLSALSDWYSVYTSAIAFTVYMNAVWHGWAIPLFLFLAILRLSLNYLIARGWRIQWSIVP
EVSEPVEPPKEDLTVSEKFQLVLDVAQKAQNLFGKMADILEKIKNLFMWVQPEITQKLYVALWAAFLASC
FFPYRLVGLAVGLYAGIKFFLIDFIFKRCPRLRAKYDTPYIIWRSLPTDPQLKERSSAAVSRRLQTTSSR
SYVPSAPAGLGKEEDAGRFHSTKKGNFHEIFNLTENERPLAVCENGWRCCLINRDRKMPTDYIRNGVLYV
TENYLCFESSKSGSSKRNKVIKLVDITDIQKYKVLSVLPGSGMGIAVSTPSTQKPLVFGAMVHRDEAFET
ILSQYIKITSAAASGGDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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