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Report for CCDS33357.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33357.1 Public Homo sapiens 2 HSPD1 24 110 108 CCDS HistoryNCBI Gene:3329Re-query CCDS DB by CCDS ID:33357.1Re-query CCDS DB by GeneID:3329See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33357.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000345042.6 ENSP00000340019.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000345042.6Link to Ensembl Protein Viewer:ENSP00000340019.2Re-query CCDS DB by Nucleotide ID:ENST00000345042Re-query CCDS DB by Protein ID:ENSP00000340019
Original member Current member EBI ENST00000388968.8 ENSP00000373620.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000388968.8Link to Ensembl Protein Viewer:ENSP00000373620.3Re-query CCDS DB by Nucleotide ID:ENST00000388968Re-query CCDS DB by Protein ID:ENSP00000373620
Original member Current member EBI ENST00000428204.6 ENSP00000396460.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428204.6Link to Ensembl Protein Viewer:ENSP00000396460.2Re-query CCDS DB by Nucleotide ID:ENST00000428204Re-query CCDS DB by Protein ID:ENSP00000396460
Original member Current member EBI ENST00000439605.2 ENSP00000402478.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000439605.2Link to Ensembl Protein Viewer:ENSP00000402478.2Re-query CCDS DB by Nucleotide ID:ENST00000439605Re-query CCDS DB by Protein ID:ENSP00000402478
Original member Current member EBI ENST00000418022.2 ENSP00000412227.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000418022.2Link to Ensembl Protein Viewer:ENSP00000412227.2Re-query CCDS DB by Nucleotide ID:ENST00000418022Re-query CCDS DB by Protein ID:ENSP00000412227
Original member Current member EBI ENST00000452200.6 ENSP00000412717.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000452200.6Link to Ensembl Protein Viewer:ENSP00000412717.2Re-query CCDS DB by Nucleotide ID:ENST00000452200Re-query CCDS DB by Protein ID:ENSP00000412717
Original member Current member EBI ENST00000426480.2 ENSP00000414446.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000426480.2Link to Ensembl Protein Viewer:ENSP00000414446.2Re-query CCDS DB by Nucleotide ID:ENST00000426480Re-query CCDS DB by Protein ID:ENSP00000414446
Original member Current member EBI ENST00000677913.1 ENSP00000503139.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677913.1Link to Ensembl Protein Viewer:ENSP00000503139.1Re-query CCDS DB by Nucleotide ID:ENST00000677913Re-query CCDS DB by Protein ID:ENSP00000503139
Original member Current member EBI ENST00000678761.1 ENSP00000503894.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678761.1Link to Ensembl Protein Viewer:ENSP00000503894.1Re-query CCDS DB by Nucleotide ID:ENST00000678761Re-query CCDS DB by Protein ID:ENSP00000503894
Original member Current member NCBI NM_002156.5 NP_002147.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002156.5Link to Protein Sequence:NP_002147.2Re-query CCDS DB by Nucleotide ID:NM_002156Re-query CCDS DB by Protein ID:NP_002147Link to BLAST:NP_002147.2
Original member Current member NCBI NM_199440.2 NP_955472.1 Accepted alive Link to Nucleotide Sequence:NM_199440.2Link to Protein Sequence:NP_955472.1Re-query CCDS DB by Nucleotide ID:NM_199440Re-query CCDS DB by Protein ID:NP_955472Link to BLAST:NP_955472.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002147.2 573 P10809-1 573 100% 0 0
NP_955472.1 573 P10809-1 573 100% 0 0

Chromosomal Locations for CCDS 33357.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 197487046 197487198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197487858 197488036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197488317 197488491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197489002 197489247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197490197 197490296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197493324 197493492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197494157 197494250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197494657 197494752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197495294 197495376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197497140 197497392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197498675 197498848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1722 nt):
ATGCTTCGGTTACCCACAGTCTTTCGCCAGATGAGACCGGTGTCCAGGGTACTGGCTCCTCATCTCACTC
GGGCTTATGCCAAAGATGTAAAATTTGGTGCAGATGCCCGAGCCTTAATGCTTCAAGGTGTAGACCTTTT
AGCCGATGCTGTGGCCGTTACAATGGGGCCAAAGGGAAGAACAGTGATTATTGAGCAGAGTTGGGGAAGT
CCCAAAGTAACAAAAGATGGTGTGACTGTTGCAAAGTCAATTGACTTAAAAGATAAATACAAAAACATTG
GAGCTAAACTTGTTCAAGATGTTGCCAATAACACAAATGAAGAAGCTGGGGATGGCACTACCACTGCTAC
TGTACTGGCACGCTCTATAGCCAAGGAAGGCTTCGAGAAGATTAGCAAAGGTGCTAATCCAGTGGAAATC
AGGAGAGGTGTGATGTTAGCTGTTGATGCTGTAATTGCTGAACTTAAAAAGCAGTCTAAACCTGTGACCA
CCCCTGAAGAAATTGCACAGGTTGCTACGATTTCTGCAAACGGAGACAAAGAAATTGGCAATATCATCTC
TGATGCAATGAAAAAAGTTGGAAGAAAGGGTGTCATCACAGTAAAGGATGGAAAAACACTGAATGATGAA
TTAGAAATTATTGAAGGCATGAAGTTTGATCGAGGCTATATTTCTCCATACTTTATTAATACATCAAAAG
GTCAGAAATGTGAATTCCAGGATGCCTATGTTCTGTTGAGTGAAAAGAAAATTTCTAGTATCCAGTCCAT
TGTACCTGCTCTTGAAATTGCCAATGCTCACCGTAAGCCTTTGGTCATAATCGCTGAAGATGTTGATGGA
GAAGCTCTAAGTACACTCGTCTTGAATAGGCTAAAGGTTGGTCTTCAGGTTGTGGCAGTCAAGGCTCCAG
GGTTTGGTGACAATAGAAAGAACCAGCTTAAAGATATGGCTATTGCTACTGGTGGTGCAGTGTTTGGAGA
AGAGGGATTGACCCTGAATCTTGAAGACGTTCAGCCTCATGACTTAGGAAAAGTTGGAGAGGTCATTGTG
ACCAAAGACGATGCCATGCTCTTAAAAGGAAAAGGTGACAAGGCTCAAATTGAAAAACGTATTCAAGAAA
TCATTGAGCAGTTAGATGTCACAACTAGTGAATATGAAAAGGAAAAACTGAATGAACGGCTTGCAAAACT
TTCAGATGGAGTGGCTGTGCTGAAGGTTGGTGGGACAAGTGATGTTGAAGTGAATGAAAAGAAAGACAGA
GTTACAGATGCCCTTAATGCTACAAGAGCTGCTGTTGAAGAAGGCATTGTTTTGGGAGGGGGTTGTGCCC
TCCTTCGATGCATTCCAGCCTTGGACTCATTGACTCCAGCTAATGAAGATCAAAAAATTGGTATAGAAAT
TATTAAAAGAACACTCAAAATTCCAGCAATGACCATTGCTAAGAATGCAGGTGTTGAAGGATCTTTGATA
GTTGAGAAAATTATGCAAAGTTCCTCAGAAGTTGGTTATGATGCTATGGCTGGAGATTTTGTGAATATGG
TGGAAAAAGGAATCATTGACCCAACAAAGGTTGTGAGAACTGCTTTATTGGATGCTGCTGGTGTGGCCTC
TCTGTTAACTACAGCAGAAGTTGTAGTCACAGAAATTCCTAAAGAAGAGAAGGACCCTGGAATGGGTGCA
ATGGGTGGAATGGGAGGTGGTATGGGAGGTGGCATGTTCTAA

Translation (573 aa):
MLRLPTVFRQMRPVSRVLAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGS
PKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEI
RRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDKEIGNIISDAMKKVGRKGVITVKDGKTLNDE
LEIIEGMKFDRGYISPYFINTSKGQKCEFQDAYVLLSEKKISSIQSIVPALEIANAHRKPLVIIAEDVDG
EALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMAIATGGAVFGEEGLTLNLEDVQPHDLGKVGEVIV
TKDDAMLLKGKGDKAQIEKRIQEIIEQLDVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDSLTPANEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLI
VEKIMQSSSEVGYDAMAGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEVVVTEIPKEEKDPGMGA
MGGMGGGMGGGMF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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