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Report for CCDS33347.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33347.1 Public Homo sapiens 2 FAM171B 24 110 108 CCDS HistoryNCBI Gene:165215Re-query CCDS DB by CCDS ID:33347.1Re-query CCDS DB by GeneID:165215See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33347.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304698.10 ENSP00000304108.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304698.10Link to Ensembl Protein Viewer:ENSP00000304108.5Re-query CCDS DB by Nucleotide ID:ENST00000304698Re-query CCDS DB by Protein ID:ENSP00000304108
Original member Current member NCBI NM_177454.4 NP_803237.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_177454.4Link to Protein Sequence:NP_803237.3Re-query CCDS DB by Nucleotide ID:NM_177454Re-query CCDS DB by Protein ID:NP_803237Link to BLAST:NP_803237.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_803237.3 826 Q6P995-1 826 100% 0 0

Chromosomal Locations for CCDS 33347.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 186694174 186694411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186740228 186740461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186743483 186743575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186747092 186747250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186751134 186751304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186753933 186754049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186761113 186761236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186761479 186762823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2481 nt):
ATGGCGAGGCTCTGCCGGCGTGTCCCCTGCACCCTGCTTCTCGGCCTGGCCGTGGTGCTGCTGAAAGCGC
GGCTGGTCCCCGCGGCCGCCAGAGCGGAACTCAGCCGCTCCGACCTCAGCCTCATCCAACAGCAGCAGCA
GCAGCAGCAACAACAACAACAACAGCAAAAGCAGCTGGAGGAGGCTGAGGAGGAGAGGACAGAGGTGCCT
GGGGCAACCTCCACCTTGACGGTTCCAGTGTCTGTATTTATGTTGAAAGTCCAGGTGAATGACATCATCA
GTCGTCAGTACCTGAGCCAAGCAGTTGTAGAAGTGTTTGTAAACTACACGAAGACAAATTCCACAGTAAC
TAAAAGCAATGGAGCAGTGCTGATAAAAGTACCCTACAAATTAGGACTTAGTTTAACTATTATTGCTTAC
AAAGATGGCTACGTGTTGACCCCTCTGCCTTGGAAAACCAGAAGAATGCCAATATATTCATCAGTTACAC
TTTCACTGTTCCCGCAAAGCCAAGCAAATATATGGCTATTTGAAGACACTGTTTTAATTACTGGAAAATT
AGCTGATGCCAAGTCTCAACCAAGTGTTCAGTTTTCAAAAGCCTTAATTAAACTTCCTGACAACCATCAT
ATTAGCAACGTTACTGGCTATCTTACAGTTCTACAACAGTTTTTGAAAGTGGACAATTTTCTGCATACAA
CTGGAATTACTCTCAATAAACCAGGTTTTGAAAACATTGAATTGACTCCTCTTGCTGCAATATGTGTGAA
AATATATTCTGGAGGAAAAGAACTAAAGGTCAATGGCTCTATTCAAGTTTCTCTTCCTCTTCTACGTCTG
AATGATATAAGTGCAGGGGATCGCATACCTGCTTGGACATTTGATATGAACACAGGTGCTTGGGTAAATC
ATGGTCGGGGAATGGTCAAGGAACATAACAATCATTTAATCTGGACATATGATGCACCACATTTGGGGTA
CTGGATAGCAGCTCCACTTCCAGGAACTAGAGGTTCAGGTATAAATGAAGATTCCAAGGACATAACTGCC
TACCACACAGTGTTTCTTACAGCCATATTAGGAGGAACAATAGTCATTGTCATTGGATTTTTTGCTGTAC
TACTTTGTTATTGCAGGGACAAGTGTGGTACTCCACAGAAAAGAGAAAGAAATATCACTAAACTTGAGGT
CCTCAAGAGAGACCAGACAACTTCAACAACACACATAAATCATATCAGTACAGTTAAAGTTGCATTAAAA
GCTGAGGACAAGTCGCAGTTATTCAATGCCAAAAACTCCTCATATAGTCCTCAGAAAAAGGAACCATCAA
AGGCAGAAACAGAAGAAAGAGTTTCCATGGTAAAAACTCGGGACGATTTTAAAATCTACAATGAAGATGT
TTCATTTCTATCAGTCAATCAAAATAATTACTCAAGAAACCCAACACAGTCTTTGGAGCCCAATGTAGGG
TCCAAACAACCTAAACATATTAACAACAATCTATCTTCATCTCTAGGTGATGCTCAAGATGAAAAGAGGT
ATCTCACAGGTAATGAGGAGGCGTATGGGCGTTCCCATATTCCTGAACAGCTTATGCATATTTACAGCCA
ACCCATTGCCATCCTTCAAACATCTGACCTTTTCTCCACACCGGAACAATTACATACTGCTAAGTCAGCT
ACTTTGCCAAGAAAGGGACAGTTAGTCTATGGCCAATTGATGGAACCAGTAAATCGAGAGAACTTTACGC
AGACCTTGCCCAAAATGCCAATTCATTCTCATGCACAGCCCCCAGATGCCAGGGAAGAGGATATCATACT
TGAAGGTCAACAGAGCCTGCCATCCCAGGCTTCAGATTGGAGCCGATACTCAAGCAGCTTACTGGAATCC
GTCTCTGTTCCTGGAACACTAAATGAGGCTGTTGTAATGACTCCATTTTCATCGGAACTTCAAGGAATTT
CAGAACAGACCCTCCTGGAGCTGTCCAAAGGAAAGCCCTCCCCGCATCCCAGAGCCTGGTTTGTGTCTCT
TGATGGAAAGCCAGTTGCACAAGTGAGGCACTCCTTTATAGACCTGAAAAAGGGCAAGAGAACCCAGAGC
AATGACACCAGTCTGGACTCTGGGGTGGACATGAATGAGCTTCACTCAAGTAGAAAGCTCGAGAGGGAGA
AAACATTCATCAAAAGCATGCATCAGCCCAAGATCCTTTACTTAGAAGATTTAGACCTAAGCAGCAGTGA
GAGTGGAACCACCGTCTGTTCCCCTGAGGACCCAGCTTTAAGGCACATCCTAGATGGAGGGAGTGGAGTG
ATCATGGAGCACCCTGGAGAAGAGTCGCCAGGAAGGAAAAGCACTGTTGAAGATTTTGAAGCTAATACAT
CCCCCACTAAAAGAAGGGGCAGACCACCACTAGCCAAAAGAGATAGCAAGACTAACATCTGGAAGAAGCG
AGAGGAACGCCCACTGATTCCCATAAATTAA

Translation (826 aa):
MARLCRRVPCTLLLGLAVVLLKARLVPAAARAELSRSDLSLIQQQQQQQQQQQQQQKQLEEAEEERTEVP
GATSTLTVPVSVFMLKVQVNDIISRQYLSQAVVEVFVNYTKTNSTVTKSNGAVLIKVPYKLGLSLTIIAY
KDGYVLTPLPWKTRRMPIYSSVTLSLFPQSQANIWLFEDTVLITGKLADAKSQPSVQFSKALIKLPDNHH
ISNVTGYLTVLQQFLKVDNFLHTTGITLNKPGFENIELTPLAAICVKIYSGGKELKVNGSIQVSLPLLRL
NDISAGDRIPAWTFDMNTGAWVNHGRGMVKEHNNHLIWTYDAPHLGYWIAAPLPGTRGSGINEDSKDITA
YHTVFLTAILGGTIVIVIGFFAVLLCYCRDKCGTPQKRERNITKLEVLKRDQTTSTTHINHISTVKVALK
AEDKSQLFNAKNSSYSPQKKEPSKAETEERVSMVKTRDDFKIYNEDVSFLSVNQNNYSRNPTQSLEPNVG
SKQPKHINNNLSSSLGDAQDEKRYLTGNEEAYGRSHIPEQLMHIYSQPIAILQTSDLFSTPEQLHTAKSA
TLPRKGQLVYGQLMEPVNRENFTQTLPKMPIHSHAQPPDAREEDIILEGQQSLPSQASDWSRYSSSLLES
VSVPGTLNEAVVMTPFSSELQGISEQTLLELSKGKPSPHPRAWFVSLDGKPVAQVRHSFIDLKKGKRTQS
NDTSLDSGVDMNELHSSRKLEREKTFIKSMHQPKILYLEDLDLSSSESGTTVCSPEDPALRHILDGGSGV
IMEHPGEESPGRKSTVEDFEANTSPTKRRGRPPLAKRDSKTNIWKKREERPLIPIN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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