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Report for CCDS33259.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33259.1 Public Homo sapiens 2 NMS 24 110 108 CCDS HistoryNCBI Gene:129521Re-query CCDS DB by CCDS ID:33259.1Re-query CCDS DB by GeneID:129521See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33259.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376865.1 ENSP00000366061.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376865.1Link to Ensembl Protein Viewer:ENSP00000366061.1Re-query CCDS DB by Nucleotide ID:ENST00000376865Re-query CCDS DB by Protein ID:ENSP00000366061
Original member Current member NCBI NM_001011717.1 NP_001011717.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001011717.1Link to Protein Sequence:NP_001011717.1Re-query CCDS DB by Nucleotide ID:NM_001011717Re-query CCDS DB by Protein ID:NP_001011717Link to BLAST:NP_001011717.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001011717.1 153 Q5H8A3 153 100% 0 0

Chromosomal Locations for CCDS 33259.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 100470489 100470564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100472795 100472850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100473489 100473539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100477244 100477267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100477361 100477414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100479353 100479427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100480496 100480531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100481126 100481167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100482277 100482311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100483252 100483264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (462 nt):
ATGAAACATCTTCGTCCCCAGTTCCCTCTCATCTTGGCCATCTACTGCTTCTGCATGCTACAGATTCCCT
CCTCAGGATTTCCTCAACCTTTAGCTGATCCTTCAGATGGCTTGGATATTGTGCAGCTTGAGCAGCTGGC
ATATTGTCTGAGTCAGTGGGCACCTCTTTCTCGCCAACCTAAGGATAATCAAGACATATACAAAAGGTTT
TTGTTTCACTACTCCAGAACTCAGGAGGCAACACATCCAGTTAAAACTGGGTTTCCTCCAGTGCATCCTC
TAATGCACCTGGCTGCCAAGCTCGCCAACAGGCGGATGAAGAGAATTCTGCAGCGAGGCTCGGGGACTGC
TGCAGTGGACTTCACCAAGAAGGATCACACTGCGACCTGGGGACGACCCTTTTTCCTTTTCAGGCCCAGG
AATGGAAGAAACATTGAAGATGAGGCCCAGATTCAGTGGTGA

Translation (153 aa):
MKHLRPQFPLILAIYCFCMLQIPSSGFPQPLADPSDGLDIVQLEQLAYCLSQWAPLSRQPKDNQDIYKRF
LFHYSRTQEATHPVKTGFPPVHPLMHLAAKLANRRMKRILQRGSGTAAVDFTKKDHTATWGRPFFLFRPR
NGRNIEDEAQIQW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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