NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS33233.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33233.1 Public Homo sapiens 2 TMEM150A 24 110 108 CCDS HistoryNCBI Gene:129303Re-query CCDS DB by CCDS ID:33233.1Re-query CCDS DB by GeneID:129303See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33233.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334462.10 ENSP00000334708.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334462.10Link to Ensembl Protein Viewer:ENSP00000334708.5Re-query CCDS DB by Nucleotide ID:ENST00000334462Re-query CCDS DB by Protein ID:ENSP00000334708
Original member Current member EBI ENST00000409668.1 ENSP00000387292.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409668.1Link to Ensembl Protein Viewer:ENSP00000387292.1Re-query CCDS DB by Nucleotide ID:ENST00000409668Re-query CCDS DB by Protein ID:ENSP00000387292
Original member Current member NCBI NM_001031738.3 NP_001026908.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001031738.3Link to Protein Sequence:NP_001026908.1Re-query CCDS DB by Nucleotide ID:NM_001031738Re-query CCDS DB by Protein ID:NP_001026908Link to BLAST:NP_001026908.1
Original member Current member NCBI NM_001369917.1 NP_001356846.1 Accepted alive Link to Nucleotide Sequence:NM_001369917.1Link to Protein Sequence:NP_001356846.1Re-query CCDS DB by Nucleotide ID:NM_001369917Re-query CCDS DB by Protein ID:NP_001356846Link to BLAST:NP_001356846.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001026908.1 271 Q86TG1-1 271 100% 0 0
NP_001356846.1 271 Q86TG1-1 271 100% 0 0

Chromosomal Locations for CCDS 33233.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 85599076 85599317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85599525 85599702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85599891 85600018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85600345 85600412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85601021 85601107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85601435 85601482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85601884 85601948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (816 nt):
ATGACCGCCTGGATCCTCCTGCCTGTCAGCCTGTCAGCGTTCTCCATCACTGGCATATGGACTGTGTATG
CCATGGCTGTGATGAACCACCATGTATGCCCTGTGGAGAACTGGTCCTACAACGAGTCCTGCCCTCCTGA
CCCTGCTGAGCAAGGGGGTCCCAAGACCTGCTGCACCCTGGACGATGTCCCCCTCATCAGCAAGTGTGGC
TCCTATCCCCCAGAAAGCTGCCTCTTCAGCCTCATTGGCAACATGGGTGCTTTCATGGTGGCCCTGATCT
GCCTCCTGCGCTACGGGCAGCTCCTGGAGCAGAGTCGGCACTCTTGGGTTAACACCACGGCACTCATCAC
AGGCTGCACCAACGCTGCGGGCCTCTTGGTGGTTGGCAACTTTCAGGTGGATCATGCCAGGTCTCTGCAC
TACGTTGGAGCTGGCGTGGCCTTCCCTGCGGGGCTGCTCTTTGTTTGCCTGCACTGTGCTCTCTCCTACC
AAGGGGCCACCGCCCCGCTGGACCTGGCTGTGGCCTATCTGCGAAGTGTGCTGGCTGTCATCGCCTTTAT
CACCCTGGTCCTCAGTGGAGTCTTCTTTGTCCATGAGAGTTCTCAGCTGCAACATGGGGCAGCCCTGTGT
GAGTGGGTGTGTGTCATCGATATCCTCATTTTCTATGGCACCTTCAGCTACGAGTTTGGGGCAGTCTCCT
CAGACACACTGGTGGCTGCACTGCAGCCTACCCCTGGCCGGGCCTGCAAGTCCTCCGGGAGCAGCAGCAC
CTCCACCCACCTCAACTGTGCCCCCGAGAGCATCGCTATGATCTAA

Translation (271 aa):
MTAWILLPVSLSAFSITGIWTVYAMAVMNHHVCPVENWSYNESCPPDPAEQGGPKTCCTLDDVPLISKCG
SYPPESCLFSLIGNMGAFMVALICLLRYGQLLEQSRHSWVNTTALITGCTNAAGLLVVGNFQVDHARSLH
YVGAGVAFPAGLLFVCLHCALSYQGATAPLDLAVAYLRSVLAVIAFITLVLSGVFFVHESSQLQHGAALC
EWVCVIDILIFYGTFSYEFGAVSSDTLVAALQPTPGRACKSSGSSSTSTHLNCAPESIAMI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH