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Report for CCDS3322.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3322.1 Public Homo sapiens 3 SENP5 24 110 108 CCDS HistoryNCBI Gene:205564Re-query CCDS DB by CCDS ID:3322.1Re-query CCDS DB by GeneID:205564See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3322.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000323460.10 ENSP00000327197.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000323460.10Link to Ensembl Protein Viewer:ENSP00000327197.5Re-query CCDS DB by Nucleotide ID:ENST00000323460Re-query CCDS DB by Protein ID:ENSP00000327197
Original member Current member NCBI NM_152699.5 NP_689912.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152699.5Link to Protein Sequence:NP_689912.2Re-query CCDS DB by Nucleotide ID:NM_152699Re-query CCDS DB by Protein ID:NP_689912Link to BLAST:NP_689912.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689912.2 755 Q96HI0-1 755 100% 0 0

Chromosomal Locations for CCDS 3322.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 196885182 196886694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196899666 196899771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196899924 196900062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196900365 196900412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196903533 196903610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196923414 196923551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196927796 196927879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196929633 196929683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196930813 196930923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2268 nt):
ATGAAAAAACAGAGGAAAATTCTATGGAGGAAAGGAATCCACTTAGCCTTTTCTGAGAAATGGAATACTG
GGTTTGGAGGCTTTAAGAAGTTTTATTTTCACCAACACTTGTGCATTCTGAAAGCTAAGCTGGGAAGGCC
AGTTACTTGGAATAGACAGTTGAGACATTTCCAGGGTAGAAAGAAAGCTCTTCAAATCCAGAAAACGTGG
ATCAAGGATGAACCCCTTTGTGCTAAGACCAAGTTCAATGTGGCTACTCAAAATGTTAGTACTTTGTCCT
CTAAAGTGAAAAGAAAGGACGCTAAACACTTCATTTCCTCCTCAAAGACTCTCCTGAGACTCCAAGCAGA
GAAGCTGTTGTCATCAGCAAAGAATTCTGACCATGAATACTGCAGAGAGAAAAATCTCTTGAAGGCAGTT
ACTGACTTTCCATCAAATAGTGCTTTAGGTCAGGCCAATGGTCACAGACCTAGGACAGACCCACAACCTT
CTGACTTTCCCATGAAGTTCAATGGGGAGAGCCAAAGTCCAGGTGAGAGTGGCACGATTGTGGTCACCTT
GAACAACCATAAGAGAAAGGGCTTTTGTTACGGCTGCTGCCAAGGGCCGGAGCACCACAGGAATGGGGGA
CCCTTGATTCCAAAAAAGTTCCAACTTAACCAACATAGAAGGATAAAATTATCTCCTCTTATGATGTATG
AGAAATTATCCATGATTAGATTTCGGTACAGGATTCTCAGATCCCAGCACTTCAGAACCAAAAGCAAGGT
TTGCAAGCTAAGAAAAGCCCAGCGAAGCTGGGTACAGAAAGTCACTGGGGACCATCAAGAGACCCGTAGG
GAGAACGGTGAGGGTGGCAGTTGCAGCCCATTTCCTTCCCCAGAACCTAAAGACCCTTCTTGTCGGCATC
AGCCGTACTTTCCAGATATGGACAGCAGTGCTGTGGTGAAGGGGACGAACTCTCATGTGCCTGATTGCCA
CACTAAAGGAAGCTCTTTCTTGGGCAAGGAGCTTAGTTTAGACGAAGCATTCCCTGACCAACAGAATGGC
AGTGCCACAAACGCCTGGGACCAGTCATCCTGTTCTTCTCCTAAGTGGGAGTGTACAGAGCTGATTCATG
ACATCCCCTTACCAGAACATCGTTCTAATACCATGTTCATTTCAGAAACTGAAAGAGAAATTATGACTCT
GGGTCAGGAAAATCAGACAAGTTCTGTCAGTGATGACAGAGTAAAACTGTCAGTGTCTGGAGCAGATACA
TCTGTGAGTAGCGTAGATGGGCCTGTGTCCCAAAAGGCTGTTCAAAATGAGAACTCATACCAGATGGAGG
AGGATGGATCTCTCAAGCAGAGCATTCTTAGTTCTGAGTTGCTGGACCACCCTTACTGTAAAAGTCCACT
GGAGGCTCCCTTGGTGTGCAGTGGACTCAAACTAGAAAATCAAGTAGGAGGTGGAAAGAACAGTCAGAAA
GCCTCTCCAGTGGATGATGAACAGCTGTCAGTCTGTCTTTCTGGATTCCTAGATGAGGTTATGAAGAAGT
ATGGCAGTTTGGTTCCACTCAGTGAAAAAGAAGTCCTTGGAAGATTAAAAGATGTCTTTAATGAAGACTT
TTCTAATAGAAAACCATTTATCAATAGGGAAATAACAAACTATCGGGCCAGACATCAAAAATGTAACTTC
CGTATCTTCTATAATAAACACATGCTGGATATGGACGACCTGGCGACTCTGGATGGTCAGAACTGGCTGA
ATGACCAGGTCATTAATATGTATGGTGAGCTGATAATGGATGCAGTCCCAGACAAAGTTCACTTCTTCAA
CAGCTTTTTTCATAGACAGCTGGTAACCAAAGGATATAATGGAGTAAAAAGATGGACTAAAAAGGTGGAT
TTGTTTAAAAAGAGTCTTCTGTTGATTCCTATTCACCTGGAAGTCCACTGGTCTCTCATTACTGTGACAC
TCTCTAATCGAATTATTTCATTTTATGATTCCCAAGGCATTCATTTTAAGTTTTGTGTAGAGAATATAAG
AAAGTATTTGCTGACTGAAGCCAGAGAAAAAAATAGACCTGAATTTCTTCAGGGTTGGCAGACTGCTGTT
ACGAAGTGTATTCCACAACAGAAAAACGACAGTGACTGTGGAGTCTTTGTGCTCCAGTACTGCAAGTGCC
TCGCCTTAGAGCAGCCTTTCCAGTTTTCACAAGAAGACATGCCCCGAGTGCGGAAGAGGATTTACAAGGA
GCTATGTGAGTGCCGGCTCATGGACTGA

Translation (755 aa):
MKKQRKILWRKGIHLAFSEKWNTGFGGFKKFYFHQHLCILKAKLGRPVTWNRQLRHFQGRKKALQIQKTW
IKDEPLCAKTKFNVATQNVSTLSSKVKRKDAKHFISSSKTLLRLQAEKLLSSAKNSDHEYCREKNLLKAV
TDFPSNSALGQANGHRPRTDPQPSDFPMKFNGESQSPGESGTIVVTLNNHKRKGFCYGCCQGPEHHRNGG
PLIPKKFQLNQHRRIKLSPLMMYEKLSMIRFRYRILRSQHFRTKSKVCKLRKAQRSWVQKVTGDHQETRR
ENGEGGSCSPFPSPEPKDPSCRHQPYFPDMDSSAVVKGTNSHVPDCHTKGSSFLGKELSLDEAFPDQQNG
SATNAWDQSSCSSPKWECTELIHDIPLPEHRSNTMFISETEREIMTLGQENQTSSVSDDRVKLSVSGADT
SVSSVDGPVSQKAVQNENSYQMEEDGSLKQSILSSELLDHPYCKSPLEAPLVCSGLKLENQVGGGKNSQK
ASPVDDEQLSVCLSGFLDEVMKKYGSLVPLSEKEVLGRLKDVFNEDFSNRKPFINREITNYRARHQKCNF
RIFYNKHMLDMDDLATLDGQNWLNDQVINMYGELIMDAVPDKVHFFNSFFHRQLVTKGYNGVKRWTKKVD
LFKKSLLLIPIHLEVHWSLITVTLSNRIISFYDSQGIHFKFCVENIRKYLLTEAREKNRPEFLQGWQTAV
TKCIPQQKNDSDCGVFVLQYCKCLALEQPFQFSQEDMPRVRKRIYKELCECRLMD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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