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Report for CCDS33169.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33169.1 Public Homo sapiens 2 PPP1CB 24 110 108 CCDS HistoryNCBI Gene:5500Re-query CCDS DB by CCDS ID:33169.1Re-query CCDS DB by GeneID:5500See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33169.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296122.10 ENSP00000296122.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000296122.10Link to Ensembl Protein Viewer:ENSP00000296122.6Re-query CCDS DB by Nucleotide ID:ENST00000296122Re-query CCDS DB by Protein ID:ENSP00000296122
Original member Current member EBI ENST00000395366.3 ENSP00000378769.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395366.3Link to Ensembl Protein Viewer:ENSP00000378769.2Re-query CCDS DB by Nucleotide ID:ENST00000395366Re-query CCDS DB by Protein ID:ENSP00000378769
Original member Current member EBI ENST00000420282.6 ENSP00000398839.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420282.6Link to Ensembl Protein Viewer:ENSP00000398839.2Re-query CCDS DB by Nucleotide ID:ENST00000420282Re-query CCDS DB by Protein ID:ENSP00000398839
Original member Current member EBI ENST00000441461.6 ENSP00000414918.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000441461.6Link to Ensembl Protein Viewer:ENSP00000414918.2Re-query CCDS DB by Nucleotide ID:ENST00000441461Re-query CCDS DB by Protein ID:ENSP00000414918
Original member Current member EBI ENST00000703173.1 ENSP00000515219.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703173.1Link to Ensembl Protein Viewer:ENSP00000515219.1Re-query CCDS DB by Nucleotide ID:ENST00000703173Re-query CCDS DB by Protein ID:ENSP00000515219
Original member Current member NCBI NM_002709.3 NP_002700.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002709.3Link to Protein Sequence:NP_002700.1Re-query CCDS DB by Nucleotide ID:NM_002709Re-query CCDS DB by Protein ID:NP_002700Link to BLAST:NP_002700.1
Original member Current member NCBI NM_206876.2 NP_996759.1 Accepted alive Link to Nucleotide Sequence:NM_206876.2Link to Protein Sequence:NP_996759.1Re-query CCDS DB by Nucleotide ID:NM_206876Re-query CCDS DB by Protein ID:NP_996759Link to BLAST:NP_996759.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002700.1 327 P62140 327 100% 0 0
NP_996759.1 327 P62140 327 100% 0 0

Chromosomal Locations for CCDS 33169.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 28752125 28752176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28776851 28776982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28778809 28779039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28781738 28781842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28783907 28783978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28788658 28788809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28793863 28793997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28799199 28799303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (984 nt):
ATGGCGGACGGGGAGCTGAACGTGGACAGCCTCATCACCCGGCTGCTGGAGGTACGAGGATGTCGTCCAG
GAAAGATTGTGCAGATGACTGAAGCAGAAGTTCGAGGCTTATGTATCAAGTCTCGGGAGATCTTTCTCAG
CCAGCCTATTCTTTTGGAATTGGAAGCACCGCTGAAAATTTGTGGAGATATTCATGGACAATATACAGAT
TTACTGAGATTATTTGAATATGGAGGTTTCCCACCAGAAGCCAACTATCTTTTCTTAGGAGATTATGTGG
ACAGAGGAAAGCAGTCTTTGGAAACCATTTGTTTGCTATTGGCTTATAAAATCAAATATCCAGAGAACTT
CTTTCTCTTAAGAGGAAACCATGAGTGTGCTAGCATCAATCGCATTTATGGATTCTATGATGAATGCAAA
CGAAGATTTAATATTAAATTGTGGAAGACCTTCACTGATTGTTTTAACTGTCTGCCTATAGCAGCCATTG
TGGATGAGAAGATCTTCTGTTGTCATGGAGGATTGTCACCAGACCTGCAATCTATGGAGCAGATTCGGAG
AATTATGAGACCTACTGATGTCCCTGATACAGGTTTGCTCTGTGATTTGCTATGGTCTGATCCAGATAAG
GATGTGCAAGGCTGGGGAGAAAATGATCGTGGTGTTTCCTTTACTTTTGGAGCTGATGTAGTCAGTAAAT
TTCTGAATCGTCATGATTTAGATTTGATTTGTCGAGCTCATCAGGTGGTGGAAGATGGATATGAATTTTT
TGCTAAACGACAGTTGGTAACCTTATTTTCAGCCCCAAATTACTGTGGCGAGTTTGATAATGCTGGTGGA
ATGATGAGTGTGGATGAAACTTTGATGTGTTCATTTCAGATATTGAAACCATCTGAAAAGAAAGCTAAAT
ACCAGTATGGTGGACTGAATTCTGGACGTCCTGTCACTCCACCTCGAACAGCTAATCCGCCGAAGAAAAG
GTGA

Translation (327 aa):
MADGELNVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTD
LLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECK
RRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDK
DVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGG
MMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPPRTANPPKKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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