NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS3311.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3311.1 Public Homo sapiens 3 MUC4 24 110 108 CCDS HistoryNCBI Gene:4585Re-query CCDS DB by CCDS ID:3311.1Re-query CCDS DB by GeneID:4585See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 3311.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000349607.8 ENSP00000338109.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000349607.8Link to Ensembl Protein Viewer:ENSP00000338109.4Re-query CCDS DB by Nucleotide ID:ENST00000349607Re-query CCDS DB by Protein ID:ENSP00000338109
Original member Current member NCBI NM_138297.5 NP_612154.2 Accepted alive Link to Nucleotide Sequence:NM_138297.5Link to Protein Sequence:NP_612154.2Re-query CCDS DB by Nucleotide ID:NM_138297Re-query CCDS DB by Protein ID:NP_612154Link to BLAST:NP_612154.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612154.2 1125 Q99102-12 1125 100% 0 0

Chromosomal Locations for CCDS 3311.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 195747176 195747380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195748902 195749064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195750889 195751112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195751207 195751271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195752373 195752446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195753051 195753230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195754213 195754372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195757147 195757328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195759124 195759261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195760884 195761117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195761484 195761585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195762087 195762254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195762855 195762945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195763433 195763641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195764045 195764164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195764997 195765122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195765270 195765449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195766663 195766751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195769022 195769152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195770216 195770371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195771652 195771816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195774172 195774305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195811736 195811817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3378 nt):
ATGAAGGGGGCACGCTGGAGGAGGGTCCCCTGGGTGTCCCTGAGCTGCCTGTGTCTCTGCCTCCTTCCGC
ATGTGGTCCCAGGAGTTTCCCTCTTCCCCTATGGGGCAGGCGCCGGGGACCTGGAGTTCGTCAGGAGGAC
CGTGGACTTCACCTCCCCACTCTTCAAGCCGGCGACTGGCTTCCCCCTTGGCTCCTCTCTCCGTGATTCC
CTCTACTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTACCCCAACC
CACTCCCAACAGGCTTCACAGGCCGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGACGATGCTGACTT
CTCCACTGGTCGGGGGACCACATTTTATCAGGAATACGAGACGTTCTATGGTGAACACAGCCTGCTAGTC
CAGCAGGCCGAGTCTTGGATTAGAAAGATGACAAACAACGGGGGCTACAAGGCCAGGTGGGCCCTAAAGG
TCACGTGGGTCAATGCCCACGCCTATCCTGCCCAGTGGACCCTCGGGAGCAACACCTACCAAGCCATCCT
CTCCACGGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCC
CAGCGCTCAGGCAACCCGGTGCTCATGGGCTTCTCTAGTGGAGATGGCTATTTCGAAAACAGCCCACTGA
TGTCCCAGCCAGTGTGGGAGAGGTATCGCCCTGATAGATTCCTGAATTCCAACTCAGGCCTCCAAGGGCT
GCAGTTCTACAGGCTACACCGGGAAGAAAGGCCCAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGC
CAGCCTCGGTGGCCCAGCTGGGGCTGGAACCAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGACGGG
ACTTACGATTCCAACCCGTCAGCATAGGTCGCTGGGGCCTCGGCAGTAGGCAGCTGTGCAGCTTCACCTC
TTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGTTTCGTGAAGGCTGGCACGTGCAGCGT
CCTTGGCAGTTGGCCCAGGAACTGGAGCCACAGAGCTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCT
GTGCCCTGTACCAGCAGAGGCGGCCCCACGTGGGCTGTGCTACATACAGGCCCCCACAGCCCGCCTGGAT
GTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAGTTACACCTTCAATGGGCTGGGGGACTTCCTG
CTGGTCGGGGCCCAAGACGGGAACTCCTCCTTCCTGCTTCAGGGCCGCACCGCCCAGACTGGCTCAGCCC
AGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCCAGCAGCCTGGGCCCCGTCACGGTCCAATG
GCTCCTTGAGCCTCACGACGCAATCCGTGTCCTGCTGGATAACCAGACTGTGACATTTCAGCCTGACCAT
GAAGACGGCGGAGGCCAGGAGACGTTCAACGCCACCGGAGTCCTCCTGAGCCGCAACGGCTCTGAGGTCT
CGGCCAGCTTCGACGGCTGGGCCACCGTCTCGGTGATCGCGCTCTCCAACATCCTCCACGCCTCCGCCAG
CCTCCCGCCCGAGTACCAGAACCGCACGGAGGGGCTCCTGGGGGTCTGGAATAACAATCCAGAGGACGAC
TTCAGGATGCCCAATGGCTCCACCATTCCCCCAGGGAGCCCTGAGGAGATGCTTTTCCACTTTGGAATGA
CCTGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGT
TTTCTACTCACAACTGCAAAAAAACAGCTCCTGGGCTGAACATTTGATCTCCAACTGTGACGGAGATAGC
TCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGAAGTCAGTAAAA
ACTACGAGCAGGCGAACGCCACCCTCAATCAGTACCCGCCCTCCATCAATGGTGGTCGTGTGATTGAAGC
CTACAAGGGGCAGACCACGCTGATTCAGTACACCAGCAATGCTGAGGATGCCAACTTCACGCTCAGAGAC
AGCTGCACCGACTTGGAGCTCTTTGAGAATGGGACGTTGCTGTGGACACCCAAGTCGCTGGAGCCATTCA
CTCTGGAGATTCTAGCAAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTG
CCATTGCAATGCAGAGAGCCAGTGTTTGTACAATCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTG
GCTGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGGGCTCCGAGGATGCCTGTGAGGAGC
CGTGCTTCCCGAGTGTCCACTGCGTTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCAAACCTGACTGGGGA
TGGGCGGCACTGTGCGGCTCTGGGGAGCTCTTTCCTGTGTCAGAACCAGTCCTGCCCTGTGAATTACTGC
TACAATCAAGGCCACTGCTACATCTCCCAGACTCTGGGCTGTCAGCCCATGTGCACCTGCCCCCCAGCCT
TCACTGACAGCCGCTGCTTCCTGGCTGGGAACAACTTCAGTCCAACTGTCAACCTAGAACTTCCCTTAAG
AGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAAGTCAACGCCTCGGTGGCATAC
AGACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGGAACGAATCGATTCTGCAGCAC
CGGCCTCGGGAAGCCCCATCCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTCGGGGCCCGGT
CATTGACTTCCTGAACAACCAGCTGCTGGCCGCGGTGGTGGAGGCGTTCTTATACCACGTTCCACGGAGG
AGTGAGGAGCCCAGGAACGACGTGGTCTTCCAGCCCATCTCCGGGGAAGACGTGCGCGATGTGACAGCCC
TGAACGTGAGCACGCTGAAGGCTTACTTCAGATGCGATGGCTACAAGGGCTACGACCTGGTCTACAGCCC
CCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCAC
CTGCCCAGTGGGCCCCGCTGCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGCGAGCACTGTGAGC
ACCTGAGCATGAAACTCGACGCGTTCTTCGGCATCTTCTTTGGGGCCCTGGGCGGCCTCTTGCTGCTGGG
GGTCGGGACGTTCGTGGTCCTGCGCTTCTGGGGTTGCTCCGGGGCCAGGTTCTCCTATTTCCTGAACTCA
GCTGAGGCCTTGCCTTGA

Translation (1125 aa):
MKGARWRRVPWVSLSCLCLCLLPHVVPGVSLFPYGAGAGDLEFVRRTVDFTSPLFKPATGFPLGSSLRDS
LYFTDNGQIIFPESDYQIFSYPNPLPTGFTGRDPVALVAPFWDDADFSTGRGTTFYQEYETFYGEHSLLV
QQAESWIRKMTNNGGYKARWALKVTWVNAHAYPAQWTLGSNTYQAILSTDGSRSYALFLYQSGGMQWDVA
QRSGNPVLMGFSSGDGYFENSPLMSQPVWERYRPDRFLNSNSGLQGLQFYRLHREERPNYRLECLQWLKS
QPRWPSWGWNQVSCPCSWQQGRRDLRFQPVSIGRWGLGSRQLCSFTSWRGGVCCSYGPWGEFREGWHVQR
PWQLAQELEPQSWCCRWNDKPYLCALYQQRRPHVGCATYRPPQPAWMFGDPHITTLDGVSYTFNGLGDFL
LVGAQDGNSSFLLQGRTAQTGSAQATNFIAFAAQYRSSSLGPVTVQWLLEPHDAIRVLLDNQTVTFQPDH
EDGGGQETFNATGVLLSRNGSEVSASFDGWATVSVIALSNILHASASLPPEYQNRTEGLLGVWNNNPEDD
FRMPNGSTIPPGSPEEMLFHFGMTWQINGTGLLGKRNDQLPSNFTPVFYSQLQKNSSWAEHLISNCDGDS
SCIYDTLALRNASIGLHTREVSKNYEQANATLNQYPPSINGGRVIEAYKGQTTLIQYTSNAEDANFTLRD
SCTDLELFENGTLLWTPKSLEPFTLEILARSAKIGLASALQPRTVVCHCNAESQCLYNQTSRVGNSSLEV
AGCKCDGGTFGRYCEGSEDACEEPCFPSVHCVPGKGCEACPPNLTGDGRHCAALGSSFLCQNQSCPVNYC
YNQGHCYISQTLGCQPMCTCPPAFTDSRCFLAGNNFSPTVNLELPLRVIQLLLSEEENASMAEVNASVAY
RLGTLDMRAFLRNSQVERIDSAAPASGSPIQHWMVISEFQYRPRGPVIDFLNNQLLAAVVEAFLYHVPRR
SEEPRNDVVFQPISGEDVRDVTALNVSTLKAYFRCDGYKGYDLVYSPQSGFTCVSPCSRGYCDHGGQCQH
LPSGPRCSCVSFSIYTAWGEHCEHLSMKLDAFFGIFFGALGGLLLLGVGTFVVLRFWGCSGARFSYFLNS
AEALP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH