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Report for CCDS33099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33099.1 Public Homo sapiens 19 VN1R4 24 110 108 CCDS HistoryNCBI Gene:317703Re-query CCDS DB by CCDS ID:33099.1Re-query CCDS DB by GeneID:317703See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33099.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311170.5 ENSP00000310856.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311170.5Link to Ensembl Protein Viewer:ENSP00000310856.4Re-query CCDS DB by Nucleotide ID:ENST00000311170Re-query CCDS DB by Protein ID:ENSP00000310856
Original member Current member NCBI NM_173857.3 NP_776256.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173857.3Link to Protein Sequence:NP_776256.2Re-query CCDS DB by Nucleotide ID:NM_173857Re-query CCDS DB by Protein ID:NP_776256Link to BLAST:NP_776256.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_776256.2 301 Q7Z5H5 301 100% 0 0

Chromosomal Locations for CCDS 33099.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 53266760 53267665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (906 nt):
ATGGCCTCCCGGTATGTGGCAGTGGGAATGATCTTATCACAGACCGTGGTGGGAGTCCTGGGGAGCTTCT
CTGTTCTTCTCCATTATCTCTCCTTTTACTGCACTGGGTGCAGGTTAAGGTCCACAGATTTGATTGTTAA
GCACCTGATTGTAGCCAACTTCTTAGCTCTCCGCTGTAAAGGAGTCCCCCAGACAATGGCAGCTTTTGGG
GTTAGATATTTTCTCAATGCTCTTGGGTGCAAACTTGTTTTCTATCTCCATAGAGTGGGCAGGGGAGTGT
CCATTGGCACCACCTGCCTCTTGAGTGTCTTCCAGGTGATCACGGTCAGCTCCAGGAAATCCAGGTGGGC
AAAACTTAAAGAGAAAGCCCCCAAGCATGTTGGCTTTTCTGTTCTCCTGTGCTGGATCGTGTGCATGTTG
GTAAACATCATCTTTCCCATGTATGTGACTGGCAAATGGAACTACACAAACATCACAGTGAACGAGGATT
TGGGATACTGTTCTGGGGGAGGCAACAACAAAATCGCACAGACACTGCGTGCAATGTTGTTATCATTCCC
TGATGTGTTGTGTCTGGGGCTCATGCTCTGGGTCAGCAGCTCCATGGTTTGCATACTGCACAGGCACAAG
CAGCGGGTCCAGCACATTGATAGGAGCAATCTCTCCCCCAGAGCCTCCCCAGAGAACAGAGCTACGCAGA
GCATCCTCATCCTGGTGAGCACCTTTGTGTCTTCTTACACTCTCTCCTGCCTTTTCCAAGTTTGTATGGC
TCTTTTGGATAATCCCAATAGTTTACTGGTGAACACTTCAGCCTTAATGAGTGTATGTTTCCCAACTCTC
AGCCCCTTTGTTCTCATGAGCTGTGACCCCAGTGTATACAGGTTTTGTTTTGCCTGGAAAAGATGA

Translation (301 aa):
MASRYVAVGMILSQTVVGVLGSFSVLLHYLSFYCTGCRLRSTDLIVKHLIVANFLALRCKGVPQTMAAFG
VRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSVFQVITVSSRKSRWAKLKEKAPKHVGFSVLLCWIVCML
VNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKIAQTLRAMLLSFPDVLCLGLMLWVSSSMVCILHRHK
QRVQHIDRSNLSPRASPENRATQSILILVSTFVSSYTLSCLFQVCMALLDNPNSLLVNTSALMSVCFPTL
SPFVLMSCDPSVYRFCFAWKR


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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