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Report for CCDS33097.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33097.1 Public Homo sapiens 19 ZNF347 24 110 108 CCDS HistoryNCBI Gene:84671Re-query CCDS DB by CCDS ID:33097.1Re-query CCDS DB by GeneID:84671See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33097.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334197.12 ENSP00000334146.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334197.12Link to Ensembl Protein Viewer:ENSP00000334146.6Re-query CCDS DB by Nucleotide ID:ENST00000334197Re-query CCDS DB by Protein ID:ENSP00000334146
Original member Current member NCBI NM_032584.3 NP_115973.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032584.3Link to Protein Sequence:NP_115973.2Re-query CCDS DB by Nucleotide ID:NM_032584Re-query CCDS DB by Protein ID:NP_115973Link to BLAST:NP_115973.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115973.2 839 Q96SE7-1 839 100% 0 0

Chromosomal Locations for CCDS 33097.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 53140308 53142556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53148681 53148809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53149241 53149367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53153733 53153747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2520 nt):
ATGGCTCTCACCCAGGGACAGGTGACATTCAGGGATGTGGCTATAGAATTCTCTCAGGAGGAGTGGACAT
GCCTGGACCCCGCTCAGAGGACTTTGTACAGGGACGTGATGTTGGAGAATTATAGGAACCTGGCCTCCCT
GGGAATCTCTTGTTTTGACCTCAGTATTATCTCTATGTTGGAGCAAGGGAAGGAGCCTTTCACTTTGGAG
AGCCAAGTACAAATAGCAGGAAACCCAGATGGATGGGAATGGATCAAAGCTGTGATCACAGCTCTCTCTT
CCGAATTTGTAATGAAAGATTTACTACACAAAGGGAAGAGTAATACAGGAGAAGTATTCCAAACAGTGAT
GTTGGAAAGACAGGAAAGCCAAGACATTGAAGGATGTTCCTTCAGGGAAGTCCAGAAAAATACACATGGC
CTTGAGTATCAATGCAGAGATGCTGAAGGAAATTACAAAGGAGTGCTTTTGACCCAAGAAGGCAATCTCA
CTCATGGAAGAGATGAACATGATAAAAGAGATGCAAGAAACAAGCTTATTAAAAATCAGCTTGGATTAAG
CCTTCAGTCACATCTGCCTGAACTGCAGCTTTTTCAATATGAAGGGAAAATTTATGAATGTAATCAGGTT
GAGAAGTCTTTCAACAATAATTCCTCAGTTTCACCACCTCAACAAATGCCTTATAATGTCAAAACCCACA
TTTCTAAGAAATATCTCAAAGATTTTATCTCTTCTTTATTACTCACACAGGGGCAAAAAGCAAATAATTG
GGGAAGCCCTTACAAATCTAATGGATGTGGCATGGTCTTTCCTCAAAATTCACACCTTGCAAGTCATCAG
AGAAGTCATACTAAAGAGAAACCTTACAAATGTTATGAGTGTGGCAAAGCCTTTAGAACACGTTCAAACC
TAACTACCCATCAGGTGATCCATACTGGCGAAAAACGTTACAAATGTAATGAGTGTGGTAAGGTCTTTAG
TCGAAATTCACAACTCTCACAACATCAGAAAATTCACACTGGAGAGAAACCTTATAAATGTAACGAATGT
GGCAAGGTCTTCACTCAGAATTCACACCTTGTAAGACATCGAGGAATTCATACTGGAGAGAAACCTTACA
AGTGTAATGAGTGTGGGAAAGCCTTTAGAGCTCGTTCAAGCTTAGCTATCCATCAGGCAACCCACAGTGG
AGAAAAACCTTACAAATGTAATGAATGTGGCAAGGTCTTCACTCAAAATTCACACCTTACAAATCACTGG
AGAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAGTGCGGCAAAGCCTTTGGTGTTCGTTCAAGCC
TAGCTATTCATCTGGTAATTCACACCGGAGAAAAGCCTTACAAATGTCATGAATGCGGCAAGGTCTTTAG
GCGTAATTCACACCTTGCAAGGCATCAGCTAATTCATACTGGAGAGAAACCTTATAAGTGTAATGAGTGT
GGCAAAGCCTTTAGAGCACATTCAAACCTAACTACCCATCAGGTCATCCATACTGGAGAAAAGCCTTACA
AATGTAATGAATGTGGCAAGGTCTTCACTCAAAATTCACACCTTGCAAATCATCAAAGAATTCATACTGG
AGTGAAGCCTTATATGTGTAATGAGTGCGGCAAAGCCTTCAGTGTGTATTCAAGCCTAACTACCCATCAG
GTCATCCATACTGGAGAAAAACCTTACAAATGTAATGAGTGTGGCAAGGTCTTCACTCAGAATTCACACC
TTGCAAGACATCGGGGAATTCATACTGGAGAGAAACCTTATAAATGTAATGAATGTGGCAAGGTCTTTAG
GCATAATTCATACCTTTCAAGGCATCAGCGAATTCATACTGGAGAGAAACCTTACAAGTATAATGAGTAT
GGCAAAGCCTTTAGTGAACATTCAAACCTAACTACCCATCAGGTCATCCATACTGGTGAAAAACCTTACA
AATGTAATGAGTGTGGCAAGGTCTTCACTCAGAATTCACACCTTGCAAGACATCGGAGAGTTCATACTGG
AGGTAAACCTTACCAGTGTAATGAATGTGGCAAAGCCTTTAGTCAAACATCAAAGCTTGCAAGGCATCAG
AGAGTTCATACTGGAGAGAAACCATATGAGTGTAATCAGTGTGGGAAAGCCTTTAGTGTCCGTTCAAGCC
TAACTACCCATCAGGCAATCCATACTGGAAAAAAACCTTACAAATGCAATGAGTGTGGGAAGGTCTTCAC
TCAGAATTCACACCTTGCAAGACATCGGGGAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGT
GGCAAAGCCTTTAGTCAAACTTCAAAACTTGCAAGGCATCAGAGAATTCATACCGGAGAGAAACCATATG
AGTGTGGGAAACCCTTTAGTATCTGTTCAAGCCTAACTACCCATCAGACAATCCATACTGGTGGGAAACC
TTACAAATGTAACGTGTGGAAAGTTCTAAAGTCAGAGTTCAAACCTTGCAAGCCATCACAGAATTCATAG

Translation (839 aa):
MALTQGQVTFRDVAIEFSQEEWTCLDPAQRTLYRDVMLENYRNLASLGISCFDLSIISMLEQGKEPFTLE
SQVQIAGNPDGWEWIKAVITALSSEFVMKDLLHKGKSNTGEVFQTVMLERQESQDIEGCSFREVQKNTHG
LEYQCRDAEGNYKGVLLTQEGNLTHGRDEHDKRDARNKLIKNQLGLSLQSHLPELQLFQYEGKIYECNQV
EKSFNNNSSVSPPQQMPYNVKTHISKKYLKDFISSLLLTQGQKANNWGSPYKSNGCGMVFPQNSHLASHQ
RSHTKEKPYKCYECGKAFRTRSNLTTHQVIHTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPYKCNEC
GKVFTQNSHLVRHRGIHTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPYKCNECGKVFTQNSHLTNHW
RIHTGEKPYKCNECGKAFGVRSSLAIHLVIHTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPYKCNEC
GKAFRAHSNLTTHQVIHTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPYMCNECGKAFSVYSSLTTHQ
VIHTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPYKYNEY
GKAFSEHSNLTTHQVIHTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPYQCNECGKAFSQTSKLARHQ
RVHTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPYKCNEC
GKAFSQTSKLARHQRIHTGEKPYECGKPFSICSSLTTHQTIHTGGKPYKCNVWKVLKSEFKPCKPSQNS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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