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Report for CCDS33095.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33095.1 Public Homo sapiens 19 ZNF320 24 110 108 CCDS HistoryNCBI Gene:162967Re-query CCDS DB by CCDS ID:33095.1Re-query CCDS DB by GeneID:162967See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33095.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391781.6 ENSP00000375660.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391781.6Link to Ensembl Protein Viewer:ENSP00000375660.2Re-query CCDS DB by Nucleotide ID:ENST00000391781Re-query CCDS DB by Protein ID:ENSP00000375660
Original member Current member EBI ENST00000595635.5 ENSP00000473091.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595635.5Link to Ensembl Protein Viewer:ENSP00000473091.1Re-query CCDS DB by Nucleotide ID:ENST00000595635Re-query CCDS DB by Protein ID:ENSP00000473091
Original member Current member EBI ENST00000682928.1 ENSP00000506814.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682928.1Link to Ensembl Protein Viewer:ENSP00000506814.1Re-query CCDS DB by Nucleotide ID:ENST00000682928Re-query CCDS DB by Protein ID:ENSP00000506814
Original member Current member NCBI NM_001351773.2 NP_001338702.1 Accepted alive Link to Nucleotide Sequence:NM_001351773.2Link to Protein Sequence:NP_001338702.1Re-query CCDS DB by Nucleotide ID:NM_001351773Re-query CCDS DB by Protein ID:NP_001338702Link to BLAST:NP_001338702.1
Original member Current member NCBI NM_001351774.2 NP_001338703.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001351774.2Link to Protein Sequence:NP_001338703.1Re-query CCDS DB by Nucleotide ID:NM_001351774Re-query CCDS DB by Protein ID:NP_001338703Link to BLAST:NP_001338703.1
Original member Current member NCBI NM_001351775.2 NP_001338704.1 Accepted alive Link to Nucleotide Sequence:NM_001351775.2Link to Protein Sequence:NP_001338704.1Re-query CCDS DB by Nucleotide ID:NM_001351775Re-query CCDS DB by Protein ID:NP_001338704Link to BLAST:NP_001338704.1
Original member Current member NCBI NM_001351776.2 NP_001338705.1 Accepted alive Link to Nucleotide Sequence:NM_001351776.2Link to Protein Sequence:NP_001338705.1Re-query CCDS DB by Nucleotide ID:NM_001351776Re-query CCDS DB by Protein ID:NP_001338705Link to BLAST:NP_001338705.1
Original member Current member NCBI NM_001387572.1 NP_001374501.1 Accepted alive Link to Nucleotide Sequence:NM_001387572.1Link to Protein Sequence:NP_001374501.1Re-query CCDS DB by Nucleotide ID:NM_001387572Re-query CCDS DB by Protein ID:NP_001374501Link to BLAST:NP_001374501.1
Original member Current member NCBI NM_001387573.1 NP_001374502.1 Accepted alive Link to Nucleotide Sequence:NM_001387573.1Link to Protein Sequence:NP_001374502.1Re-query CCDS DB by Nucleotide ID:NM_001387573Re-query CCDS DB by Protein ID:NP_001374502Link to BLAST:NP_001374502.1
Original member Current member NCBI NM_001387574.1 NP_001374503.1 Accepted alive Link to Nucleotide Sequence:NM_001387574.1Link to Protein Sequence:NP_001374503.1Re-query CCDS DB by Nucleotide ID:NM_001387574Re-query CCDS DB by Protein ID:NP_001374503Link to BLAST:NP_001374503.1
Original member Current member NCBI NM_001387575.1 NP_001374504.1 Accepted alive Link to Nucleotide Sequence:NM_001387575.1Link to Protein Sequence:NP_001374504.1Re-query CCDS DB by Nucleotide ID:NM_001387575Re-query CCDS DB by Protein ID:NP_001374504Link to BLAST:NP_001374504.1
Original member Current member NCBI NM_001387576.1 NP_001374505.1 Accepted alive Link to Nucleotide Sequence:NM_001387576.1Link to Protein Sequence:NP_001374505.1Re-query CCDS DB by Nucleotide ID:NM_001387576Re-query CCDS DB by Protein ID:NP_001374505Link to BLAST:NP_001374505.1
Original member Current member NCBI NM_001387577.1 NP_001374506.1 Accepted alive Link to Nucleotide Sequence:NM_001387577.1Link to Protein Sequence:NP_001374506.1Re-query CCDS DB by Nucleotide ID:NM_001387577Re-query CCDS DB by Protein ID:NP_001374506Link to BLAST:NP_001374506.1
Original member Current member NCBI NM_207333.4 NP_997216.2 Accepted alive Link to Nucleotide Sequence:NM_207333.4Link to Protein Sequence:NP_997216.2Re-query CCDS DB by Nucleotide ID:NM_207333Re-query CCDS DB by Protein ID:NP_997216Link to BLAST:NP_997216.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001338702.1 509 A2RRD8 509 100% 0 0
NP_001338703.1 509 A2RRD8 509 100% 0 0
NP_001338704.1 509 A2RRD8 509 100% 0 0
NP_001338705.1 509 A2RRD8 509 100% 0 0
NP_001374501.1 509 A2RRD8 509 100% 0 0
NP_001374502.1 509 A2RRD8 509 100% 0 0
NP_001374503.1 509 A2RRD8 509 100% 0 0
NP_001374504.1 509 A2RRD8 509 100% 0 0
NP_001374505.1 509 A2RRD8 509 100% 0 0
NP_001374506.1 509 A2RRD8 509 100% 0 0
NP_997216.2 509 A2RRD8 509 100% 0 0

Chromosomal Locations for CCDS 33095.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52880596 52881983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52888127 52888253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52890241 52890255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1530 nt):
ATGGCTCTTTCTCAGGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAAT
GCCTGGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCT
GGATATCTCTTCCAAATGCATGATGAATACATTGTCATCAACAGGGCAAGGCAATACAGAAGTGATCCAC
ACAGGGACATTGCAGAGACAAGCAAGTTATCACATTGGAGCATTTTGCTCCCAGGAAATTGAGAAAGACA
TTCATGACTTTGTGTTTCAGTGGCAAGAAGATGAAACAAATGACCATGAAGCACCCATGACAGAAATAAA
AAAGTTGACTAGTAGTACAGACCGATATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGGTCAGCTT
GAATCAAGATTTCATTTGCATTTGCGAAGACATAGGAGAATTCATACTGGAGAGAAACCTTACAAATGTG
AAGAATGTGAGAAAGTTTTCAGTTGCAAATCACATCTTGAAATACATAGGATAATTCATACTGGAGAGAA
ACCATACAAATGTAAGGTTTGCGACAAGGCTTTTAAGCATGATTCACACCTGGCAAAACATACTAGAATT
CACAGGGGAGACAAACATTACACATGTAATGAATGTGGCAAGGTTTTTGATCAAAAAGCAACCCTTGCAT
GTCATCATAGAAGTCATACTGGAGAGAAACCTTATAAGTGTAATGAGTGTGGCAAGACCTTTAGTCAGAC
ATCACACCTTGTGTACCATCATAGACTGCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAG
ACCTTCGCTCGAAATTCAGTCCTCGTAATTCATAAGGCAGTTCATACTGCAGAGAAACCCTATAAGTGTA
ATGAATGTGGCAAGGTTTTTAAGCAACGAGCAACTCTTGCAGGACATCGTAGAGTTCACACTGGAGAGAA
ACCTTACAGATGTGAAGAATGCGACAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAGGAGGATT
CATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGTGATTCACGTCTTGCAG
AACATCAGAGAGTTCATACTGGAGAGAGACCTTACACATGTAATGAATGTGGCAAGGTTTTTAGTACAAA
AGCGTACCTCGCATGTCATCAAAAACTTCATACTGGAGAGAAACTTTACGAATGTGAAGAATGTGACAAA
GTTTACATTCGCAAATCACACCTTGAAAGACATAGGAGGATTCATACAGGAGAGAAACCTCACAAGTGTG
GTGATTGTGGTAAAGCCTTTAATTCACCTTCACACCTTATTAGGCATCAGAGAATCCATACTGGACAGAA
ATCTTACAAATGTCATCAGTGTGGCAAGGTCTTTAGTCTGAGGTCACTCCTTGCAGAACATCAGAAAATT
CCTTTTGGAGACAATTGTTTCAAGTGCAATGAGTATAGCAAACCATCAAGCATTAATTGA

Translation (509 aa):
MALSQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDISSKCMMNTLSSTGQGNTEVIH
TGTLQRQASYHIGAFCSQEIEKDIHDFVFQWQEDETNDHEAPMTEIKKLTSSTDRYDQRHAGNKPIKGQL
ESRFHLHLRRHRRIHTGEKPYKCEECEKVFSCKSHLEIHRIIHTGEKPYKCKVCDKAFKHDSHLAKHTRI
HRGDKHYTCNECGKVFDQKATLACHHRSHTGEKPYKCNECGKTFSQTSHLVYHHRLHTGEKPYKCNECGK
TFARNSVLVIHKAVHTAEKPYKCNECGKVFKQRATLAGHRRVHTGEKPYRCEECDKVFSRKSHLERHRRI
HTGEKPYKCKVCDKAFRSDSRLAEHQRVHTGERPYTCNECGKVFSTKAYLACHQKLHTGEKLYECEECDK
VYIRKSHLERHRRIHTGEKPHKCGDCGKAFNSPSHLIRHQRIHTGQKSYKCHQCGKVFSLRSLLAEHQKI
PFGDNCFKCNEYSKPSSIN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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