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Report for CCDS33092.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33092.1 Public Homo sapiens 19 ZNF701 24 110 108 CCDS HistoryNCBI Gene:55762Re-query CCDS DB by CCDS ID:33092.1Re-query CCDS DB by GeneID:55762See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33092.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391785.8 ENSP00000375662.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000391785.8Link to Ensembl Protein Viewer:ENSP00000375662.2Re-query CCDS DB by Nucleotide ID:ENST00000391785Re-query CCDS DB by Protein ID:ENSP00000375662
Original member Current member NCBI NM_018260.3 NP_060730.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018260.3Link to Protein Sequence:NP_060730.2Re-query CCDS DB by Nucleotide ID:NM_018260Re-query CCDS DB by Protein ID:NP_060730Link to BLAST:NP_060730.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060730.2 465 Q9NV72-2 465 100% 0 0

Chromosomal Locations for CCDS 33092.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52574148 52574162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52575895 52576021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52582202 52583457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1398 nt):
ATGGCTCTTCTTCAGGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAAT
GCCTGGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCT
GGATACCTCTTCCAAATGCATGATGAAGATGTTCTCATCAACAGGACAAGGCAATACAGAAGTGGTCCAC
ACAGGGACATTGCAAATACATGCAAGTCATCACATTGGAGATACTTGCTTCCAGGAAATTGAGAAAGATA
TTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATGGCCATGAAGCACTCATGACAAAAACCAA
AAAGTTGATGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGGAAACAAACCTATTAAAAATGAGCTT
GGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAGGGAAAATTGGTAATCAAG
TTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGTAGGCCAAAAACTCG
TATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAACGGGAAGTACACACA
AGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAAAACATC
AGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGATA
CCTTGCATGCCATAGATGTCACACTGGTGAGAATCCTTACACGTGTAATGAGTGTGGCAAGACATTCAGT
CACAATTCAGCCCTGTTAGTTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTG
GCAAGGTTTTTAATCAACAATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAA
ATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGA
GAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTG
TAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTGTTCAAAATTCATCTCT
TGTAATGCATAAGGTCATTCATACTGGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAAT
CACAAATCAAACCTTGCATGTCATCGTAGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTG
GCAAGGTTTTTAATCGAAAATCAAACCTTGAACGTCATCATAGACTTCATACTGGAAAGAAATCTTAG

Translation (465 aa):
MALLQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDTSSKCMMKMFSSTGQGNTEVVH
TGTLQIHASHHIGDTCFQEIEKDIHDFVFQWQENETNGHEALMTKTKKLMSSTERHDQRHAGNKPIKNEL
GSSFHSHLPEVHIFHPEGKIGNQVEKAINDAFSVSASQRISCRPKTRISNKYRNNFLQSSLLTQKREVHT
REKSFQRNESGKAFNGSSLLKKHQIIHLGDKQYKCDVCGKDFHQKRYLACHRCHTGENPYTCNECGKTFS
HNSALLVHKAIHTGEKPYKCNECGKVFNQQSNLARHHRVHTGEKPYKCEECDKVFSRKSHLERHRRIHTG
EKPYKCKVCDKAFRRDSHLAQHTVIHTGEKPYKCNECGKTFVQNSSLVMHKVIHTGEKRYKCNECGKVFN
HKSNLACHRRLHTGEKPYKCNECGKVFNRKSNLERHHRLHTGKKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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