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Report for CCDS33048.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33048.1 Public Homo sapiens 19 ZNF235 24 110 108 CCDS HistoryNCBI Gene:9310Re-query CCDS DB by CCDS ID:33048.1Re-query CCDS DB by GeneID:9310See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33048.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000291182.9 ENSP00000291182.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000291182.9Link to Ensembl Protein Viewer:ENSP00000291182.3Re-query CCDS DB by Nucleotide ID:ENST00000291182Re-query CCDS DB by Protein ID:ENSP00000291182
Original member Current member NCBI NM_004234.4 NP_004225.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004234.4Link to Protein Sequence:NP_004225.3Re-query CCDS DB by Nucleotide ID:NM_004234Re-query CCDS DB by Protein ID:NP_004225Link to BLAST:NP_004225.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004225.3 738 Q14590-1 738 100% 0 0

Chromosomal Locations for CCDS 33048.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44287218 44289196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44298808 44298903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44299606 44299732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44303390 44303404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2217 nt):
ATGACCAAGTTCCAGGAGGCAGTGACATTCAAGGATGTGGCTGTGGCCTTCACTGAGGAGGAGCTGGGGC
TGCTGGACTCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTTAGGAACCTGGTTTCAGT
GGGACATCAGTCCTTCAAACCAGATATGATATCCCAGTTGGAGAGGGAAGAAAAGCTTTGGATGAAGGAG
CTTCAAACCCAAAGAGGTAAGCATTCAGGAGACAGGAATCAAAATGAGATGGCAACTCTTCACAAAGCAG
GATTAAGGTGCTTTTCACTGGGAGAGCTTTCATGCTGGCAAATCAAGAGACACATTGCGAGCAAATTAGC
CAGAAGTCAAGACTCCATGATAAATATTGAAGGAAAGAGCTCTCAGTTCCCCAAGCACCATGATTCCCCC
TGTCAAGTGGGAGCAGGAGAATCTATTCAAGCTTCTGTGGATGACAACTGTCTAGTGAATCACATAGGGG
ATCATTCCAGTATCATTGAAAATCAAGAATTTCCAACTGGGAAAGTTCCGAATTCTTGGAGTAAAATATA
TCTGAATGAGACACAGAATTATCAGAGAAGTTGTAAGCAGACTCAGATGAAAAACAAACTATGTATATTT
GCTCCATATGTTGACATTTTCAGTTGTATTTCACACCACCATGATGATAATATAGTGCACAAAAGAGATA
AAGTTCATAGCAATAGTGATTGTGGTAAAGATACCCTAAAGGTATCACCTCTTACCCAGCGTAGTATTCA
CACAGGACAGAAAACCTACCAGGGTAATGAATGTGAAGAAGCCTTCAATGATAGCTCCAGTCTTGAACTT
CATAAACAGGTACACTTGGGAAAGAAGTCTCCAGCGTGTAGTACACATGAGAAGGACACCAGTTATAGCT
CAGGTATTCCTGTTCAACAAAGTGTTCGTACTGGGAAAAAACGCTATTGGTGTCATGAATGTGGTAAAGG
TTTCAGTCAGAGCTCAAATCTGCAAACTCATCAGAGAGTCCACACAGGGGAGAAACCCTATACATGCCAC
GAGTGTGGTAAGAGCTTTAATCAGAGCTCACATCTTTATGCTCATTTGCCTATTCACACAGGAGAGAAGC
CCTATAGATGTGACAGTTGTGGGAAGGGCTTCAGTCGTAGCACAGATCTTAACATTCATTGCAGAGTTCA
CACTGGAGAGAAACCTTATAAATGTGAGGTGTGTGGGAAGGGCTTCACTCAGAGATCACATCTTCAGGCC
CATGAAAGAATTCACACTGGAGAGAAACCATATAAATGTGGGGATTGTGGTAAACGCTTTAGTTGTAGCT
CAAATCTTCATACCCATCAGAGAGTCCACACTGAAGAAAAACCATACAAATGTGATGAGTGTGGTAAGTG
CTTTAGTTTGAGCTTTAATCTTCATAGTCATCAACGAGTCCACACAGGAGAAAAACCATATAAATGTGAA
GAGTGTGGTAAGGGTTTTAGTTCAGCCTCAAGTTTCCAGAGCCATCAGAGGGTCCATACAGGAGAGAAAC
CATTTCGATGCAACGTGTGTGGGAAAGGCTTCAGTCAGAGTTCATACTTTCAAGCACATCAGAGAGTCCA
CACTGGAGAAAAACCATACAAATGTGAAGTGTGTGGGAAGCGCTTCAATTGGAGCTTGAATCTTCACAAT
CATCAGAGAGTCCACACCGGAGAGAAACCCTACAAATGTGAAGAGTGTGGTAAGGGTTTCAGTCAGGCTT
CAAATCTTCAAGCCCATCAGAGCGTCCACACTGGGGAAAAACCATTCAAGTGTGATGCATGTCAGAAGCG
ATTCAGTCAGGCCTCACACCTTCAAGCCCATCAGAGAGTCCACACCGGAGAGAAACCATATAAATGTGAC
ACTTGTGGTAAGGCCTTCAGCCAGAGGTCAAATCTTCAAGTCCATCAGATAATTCACACTGGAGAGAAAC
CATTTAAATGTGAGGAATGTGGGAAAGAATTCAGTTGGAGTGCTGGTCTCAGTGCCCATCAGAGGGTCCA
CACAGGAGAGAAACCCTATACGTGTCAGCAGTGTGGGAAGGGCTTCAGTCAGGCCTCACATTTTCACACA
CACCAGAGAGTCCACACTGGAGAGAGGCCTTACATATGTGATGTCTGTTGTAAGGGCTTCAGTCAGAGGT
CACATCTCATCTACCATCAGAGAGTCCACACTGGAGGGAATCTGTAG

Translation (738 aa):
MTKFQEAVTFKDVAVAFTEEELGLLDSAQRKLYRDVMLENFRNLVSVGHQSFKPDMISQLEREEKLWMKE
LQTQRGKHSGDRNQNEMATLHKAGLRCFSLGELSCWQIKRHIASKLARSQDSMINIEGKSSQFPKHHDSP
CQVGAGESIQASVDDNCLVNHIGDHSSIIENQEFPTGKVPNSWSKIYLNETQNYQRSCKQTQMKNKLCIF
APYVDIFSCISHHHDDNIVHKRDKVHSNSDCGKDTLKVSPLTQRSIHTGQKTYQGNECEEAFNDSSSLEL
HKQVHLGKKSPACSTHEKDTSYSSGIPVQQSVRTGKKRYWCHECGKGFSQSSNLQTHQRVHTGEKPYTCH
ECGKSFNQSSHLYAHLPIHTGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQA
HERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCE
ECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHN
HQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYKCD
TCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTGEKPYTCQQCGKGFSQASHFHT
HQRVHTGERPYICDVCCKGFSQRSHLIYHQRVHTGGNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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