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Report for CCDS33045.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33045.1 Public Homo sapiens 19 ZNF222 24 110 108 CCDS HistoryNCBI Gene:7673Re-query CCDS DB by CCDS ID:33045.1Re-query CCDS DB by GeneID:7673See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33045.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000187879.12 ENSP00000187879.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000187879.12Link to Ensembl Protein Viewer:ENSP00000187879.6Re-query CCDS DB by Nucleotide ID:ENST00000187879Re-query CCDS DB by Protein ID:ENSP00000187879
Original member Current member NCBI NM_013360.3 NP_037492.2 Accepted alive Link to Nucleotide Sequence:NM_013360.3Link to Protein Sequence:NP_037492.2Re-query CCDS DB by Nucleotide ID:NM_013360Re-query CCDS DB by Protein ID:NP_037492Link to BLAST:NP_037492.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037492.2 451 Q9UK12-1 451 100% 0 0

Chromosomal Locations for CCDS 33045.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44026072 44026086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44027023 44027149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44031817 44033030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1356 nt):
ATGGCAAAGCTCTACGAGGCAGTGACCTTCAAGGATGTGGCTGTGATCTTCACTGAGGAGGAGCTGGGGC
TGCTGGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTTGAGAACTTCAGGAACCTGCTCTCAGT
GGGAGGCAAGATCCAAACTGAGATGGAGACTGTTCCAGAAGCAGGAACACATGAAGAATTTTCCTGCAAG
CAAATTTGGGAACAAATTGCAAGTGACTTAACCAGGTCTCAAGATACCACCATAAGTAACTCTCAGTTAT
TTGAACAAGATGACAACCCCTCCCAGATTAAAGCAAGACTATCTACAGTTCACACAAGAGAAAAACCTTT
CCAGGGTGAAAATTGTAAACAGTTCTTCAGTGATGTTTCCTTCTTTGATCTTCCTCAGCAGTTATATTCA
GGAGAGAAGTCTCATACCTGTGATGAGTGTGGAAAAAGCTTCTGTTACATCTCAGCCCTTCATATTCATC
AGAGGGTCCACATGGGAGTGAAATGCTATAAGTGTGATGTGTGTGGTAAGGAATTTAGTCAGAGCTCACG
TCTGCAAACTCATCAAAGAGTCCACACTGGAGAGAAACCATTCAAATGTGAGCAGTGTGGGAAAGGCTTC
AGATGTAGATCAGCACTTAAAGTTCATTGCAAATTACACATGAGAGAGAAACCTTATAATTGTGAGAAAT
GTGGGAAGGCTTTCATGCACAATTTCCAGCTTCAGAAACATCACAGAATTCATACTGGGGAGAAGCCATT
CAAATGTGAAATATGTGGTAAGAGCTTCTGTCTTAGGTCAAGTCTTAATAGGCATTGCATGGTCCACACA
GCAGAGAAACTGTACAAATCTGAAAAGTATGGAAGAGGTTTCATTGATAGGCTAGATTTGCATAAGCATC
AGATGATTCATATGGGACAGAAACCATATAATTGTAAAGAATGTGGGAAGAGCTTCAAATGGTCCTCATA
TCTTTTGGTCCATCAACGAGTCCACACTGGAGAAAAGCCATACAAATGTGAGGAGTGTGGGAAGGGCTAC
ATTAGTAAGTCAGGTCTTGACTTCCACCATAGAACCCACACGGGAGAGAGATCTTATAACTGTGATAACT
GCGGGAAGAGCTTTAGACATGCTTCTAGTATTTTGAATCATAAGAAACTCCACTGCCAAAGAAAGCCATT
GAAATGTGAAGACTGTGGAAAGAGGCTTGTATGCCGGTCATACTGTAAAGACCAACAAAGAGACCACAGT
GGAGAAAACCCATCCAAATGTGAGGACTGTGGGAAGCGCTACAAGAGGCGCTTGAATCTGGATATAATTT
TATCATTATTTTTAAATGACATATAA

Translation (451 aa):
MAKLYEAVTFKDVAVIFTEEELGLLDPAQRKLYRDVMLENFRNLLSVGGKIQTEMETVPEAGTHEEFSCK
QIWEQIASDLTRSQDTTISNSQLFEQDDNPSQIKARLSTVHTREKPFQGENCKQFFSDVSFFDLPQQLYS
GEKSHTCDECGKSFCYISALHIHQRVHMGVKCYKCDVCGKEFSQSSRLQTHQRVHTGEKPFKCEQCGKGF
RCRSALKVHCKLHMREKPYNCEKCGKAFMHNFQLQKHHRIHTGEKPFKCEICGKSFCLRSSLNRHCMVHT
AEKLYKSEKYGRGFIDRLDLHKHQMIHMGQKPYNCKECGKSFKWSSYLLVHQRVHTGEKPYKCEECGKGY
ISKSGLDFHHRTHTGERSYNCDNCGKSFRHASSILNHKKLHCQRKPLKCEDCGKRLVCRSYCKDQQRDHS
GENPSKCEDCGKRYKRRLNLDIILSLFLNDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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