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Report for CCDS32984.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32984.1 Public Homo sapiens 19 ZNF536 24 110 108 CCDS HistoryNCBI Gene:9745Re-query CCDS DB by CCDS ID:32984.1Re-query CCDS DB by GeneID:9745See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32984.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355537.4 ENSP00000347730.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355537.4Link to Ensembl Protein Viewer:ENSP00000347730.1Re-query CCDS DB by Nucleotide ID:ENST00000355537Re-query CCDS DB by Protein ID:ENSP00000347730
Original member Current member EBI ENST00000706142.1 ENSP00000516226.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000706142.1Link to Ensembl Protein Viewer:ENSP00000516226.1Re-query CCDS DB by Nucleotide ID:ENST00000706142Re-query CCDS DB by Protein ID:ENSP00000516226
Original member Current member EBI ENST00000706144.1 ENSP00000516228.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000706144.1Link to Ensembl Protein Viewer:ENSP00000516228.1Re-query CCDS DB by Nucleotide ID:ENST00000706144Re-query CCDS DB by Protein ID:ENSP00000516228
Original member Current member EBI ENST00000706146.1 ENSP00000516229.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000706146.1Link to Ensembl Protein Viewer:ENSP00000516229.1Re-query CCDS DB by Nucleotide ID:ENST00000706146Re-query CCDS DB by Protein ID:ENSP00000516229
Original member Current member NCBI NM_014717.3 NP_055532.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014717.3Link to Protein Sequence:NP_055532.1Re-query CCDS DB by Nucleotide ID:NM_014717Re-query CCDS DB by Protein ID:NP_055532Link to BLAST:NP_055532.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055532.1 1300 O15090 1300 100% 0 0

Chromosomal Locations for CCDS 32984.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 30443563 30445732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30534847 30534999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30547943 30549514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30557157 30557164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3903 nt):
ATGGAAGAAGCGAGCCTGTGCCTTGGAGTGTCTTCGGCGGAGCCGGAAGCTGAGCCCCACCTGAGTGGCC
CCGTCCTCAACGGCCAGTATGCCATGAGTCAGAAGCTGCACCAGATCACCTCCCAGCTCAGCCATGCCTT
CCCCGAGCTCCATCCCCGGCCCAACCCCGAGGAGAAGCCCCCCGCATCCCTGGAGGAGAAGGCCCACGTG
CCCATGAGCGGCCAGCCCATGGGCAGTCAGATGGCGCTCCTGGCCAACCAGCTGGGCCGGGAGGTGGACA
CCAGCCTCAACGGGAGGGTGGACTTGCAGCAGTTCCTCAACGGGCAGAACCTGGGCATCATGTCCCAGAT
GAGCGACATCGAGGACGACGCCCGCAAGAACCGCAAGTACCCGTGCCCACTCTGCGGCAAGCGCTTCCGC
TTCAACAGCATCCTCTCCCTGCACATGCGCACGCACACGGGCGAGAAGCCCTTCAAGTGCCCGTACTGCG
ACCACAGGGCGGCGCAGAAGGGGAACCTCAAGATTCACCTGCGGACCCACAAGCTGGGCAACCTGGGCAA
GGGGCGTGGGCGTGTGCGCGAGGAGAACCGCCTGCTGCACGAGCTGGAGGAGCGCGCCATCCTGCGGGAC
AAGCAGCTGAAAGGCAGCCTGCTGCAGCCCCGGCCGGACCTGAAGCCCCCGCCGCACGCCCAGCAGGCCC
CGCTGGCCGCCTGCACCCTGGCCCTGCAGGCTAACCACAGCGTTCCCGACGTGGCCCACCCGGTGCCCTC
GCCCAAGCCTGCCAGCGTGCAGGAGGACGCGGTGGCCCCGGCGGCGGGCTTCCGCTGTACCTTCTGCAAG
GGCAAGTTCAAGAAGCGCGAGGAGCTGGACCGCCACATCCGCATCTTGCACAAGCCCTACAAGTGCACGT
TGTGCGACTTCGCGGCTTCGCAGGAGGAGGAGCTCATCAGCCACGTGGAGAAGGCACACATCACGGCCGA
GTCGGCCCAGGGCCAGGGCCCCAACGGCGGTGGCGAGCAGTCGGCCAACGAGTTCCGCTGCGAGGTGTGC
GGTCAGGTGTTCAGCCAGGCGTGGTTCCTCAAGGGTCACATGCGCAAGCACAAAGACTCCTTTGAGCACT
GCTGCCAGATCTGCGGCCGGCGCTTCAAGGAGCCCTGGTTCCTCAAGAACCACATGAAGGTCCACCTCAA
CAAGCTGTCGGTGAAGAACAAGTCCCCCAGCGACCCCGAGGTGCCTGTGCCCATGGGCGGCATGTCCCAG
GAGGCCCACGCCAACCTGTACTCCAGGTACCTCTCCTGCCTGCAGAGTGGCTTCATGACCCCGGACAAAG
CCGGCCTGAGCGAGCCCAGCCAGCTCTATGGCAAGGGCGAGCTGCCCATGAAGGAGAAGGAAGCGCTGGG
GAAGCTGCTGTCTCCCATCTCCAGCATGGCCCACGGCGTCCCGGAGGGGGACAAGCACTCCCTCCTGGGA
TGCCTCAATCTCGTGCCGCCGCTGAAATCCAGCTGCATCGAGCGGCTGCAGGCGGCTGCCAAGGCTGCGG
AGATGGACCCCGTGAACAGCTACCAGGCTTGGCAGCTCATGGCCAGGGGCATGGCCATGGAACATGGCTT
CTTGTCTAAAGAGCATCCGCTGCAGCGCAACCACGAAGACACTTTGGCAAACGCCGGGGTTCTGTTTGAT
AAGGAGAAGCGGGAGTACGTGTTAGTGGGAGCAGATGGCTCCAAGCAGAAAATGCCTGCTGATTTGGTTC
ACAGCACTAAAGTGGGCAGCCAGAGAGACCTGCCAAGTAAGCTCGACCCTTTAGAAAGCAGTCGGGATTT
TTTGTCACACGGGCTGAACCAGACTCTCGAGTATAACCTGCAGGGTCCTGGGAACATGAAGGAGAAGCCC
ACCGAGTGCCCCGACTGCGGCCGGGTGTTCCGCACTTACCACCAGGTGGTCGTGCACTCCCGTGTCCACA
AGCGGGACCGCAAGGGCGAGGAGGATGGGCTGCACGTGGGCCTGGATGAGCGGCGTGGCTCGGGCAGTGA
CCAGGAGTCCCAGTCGGTGAGCCGCTCCACCACGCCGGGCTCCTCTAACGTCACCGAGGAGAGCGGGGTC
GGAGGCGGCCTCTCCCAGACCGGGAGTGCCCAGGAGGACAGCCCGCACCCCTCCTCGCCATCCTCCTCAG
ACATTGGCGAGGAGGCTGGGAGATCTGCCGGCGTCCAGCAACCAGCGCTGCTTCGCGACAGAAGCCTGGG
CTCGGCCATGAAGGACTGCCCGTACTGTGGGAAAACTTTCCGGACATCCCATCACCTTAAGGTGCACCTG
AGGATACACACAGGTGAGAAACCCTACAAGTGTCCGCACTGTGACTATGCCGGCACGCAGTCAGCATCCT
TAAAATACCACTTAGAGCGACACCATCGGGAGCGGCAGAACGGGGCTGGGCCGCTGTCTGGGCAACCCCC
AAATCAAGACCACAAGGATGAGATGTCAAGCAAAGCTTCTCTGTTCATCAGGCCAGACATCCTGAGGGGG
GCCTTCAAGGGTCTCCCTGGAATCGACTTCAGAGGAGGCCCTGCATCTCAGCAGTGGACATCAGGGGTTC
TCTCCTCTGGAGATCACTCGGGGCAGGCCACGGGCATGTCTTCGGAGGTCCCCTCAGATGCTCTGAAAGG
CACTGACCTTCCTTCCAAAAGCACCCACTTCTCTGAGATCGGAAGAGCTTATCAAAGCATTGTGAGCAAC
GGTGTGAATTTCCAAGGGTCCTTGCAAGCTTTCATGGACAGTTTTGTCCTCAGTTCCTTGAAGAAGGAGA
AGGACATGAAGGACAAAGCCCTGGCTGACCCCCCTTCCATGAAAGTCCACGGAGTGGATGGTGGTGAGGA
GAAACCCAGTGGCAAGTCCTCCCAGAGGAAGTCCGAGAAATCTCAGTATGAACCCCTGGACTTGTCTGTG
CGGCCAGATGCCGCCTCCCTCCCGGGCTCCTCGGTAACTGTGCAGGACAGCATTGCATGGCACGGCTGCT
TGTTTTGTGCTTTCACAACGTCCTCCATGGAGCTCATGGCCCTTCATCTCCAGGCCAACCACCTGGGCAA
AGCGAAACGCAAAGATAACACCATCGGGGTCACAGTCAACTGCAAAGACCAAGCCCGGGAGGCGAGTAAG
ATGGCCCTGCTGCCCTCGTTACAATCAAACAAAGACCTGGGCCTCTCCAATATGATCAGCTCTCTAGACT
CTGCTTCTGAGAAGATGGCCCAAGGTCAGCTCAAGGAGACTCTGGGAGAGCAGAAGAGCGGTGCATGGAC
CGGCCACGTGGACCCTGCATTTTGTAACTTCCCATCAGACTTCTACAAGCAGTTTGGTGTTTACCCAGGC
ATGGTTGGCTCAGGGGCCTCCAGTTCCTGCCCCAACAAGGAGCCTGATGGAAAGGCCCACTCTGAAGAGG
ATGTCCCCATCCTGATCCCCGAAACCACGAGTAAGAACACTACTGATGACCTCTCTGACATTGCCTCCTC
AGAGGACATGGACTCCTCCAAGGGGGAGAACAACGATGAAGAGGATGTTGAAACCGAACCGGAAATGATG
ACCAAGCCACTGTCTGCCCTCAGCAAAGACAGCAGCAGCGATGGCGGGGACAGCCTGCAGCCCACAGGCA
CCTCCCAGCCCGTCCAGGGACTGGTCTCACCTTTATCCCAAGCACCGGAGAAGCAGTGGCACAGCCAGGG
TCTTCTCCAAGCCCAGGACCCCTTGGCGGGCCTGCCAAAGCCGGAGCGGGGGCCCCAGAGCCTGGACAAG
CCGATGAACATGCTGTCGGTCCTCAGGGCCTACAGTTCTGATGGCTTAGCAGCCTTTAACGGACTTGCAA
GTAGCACAGCAAATTCTGGATGTATCAAGAGGCCAGACTTGTGTGGTAAGTGA

Translation (1300 aa):
MEEASLCLGVSSAEPEAEPHLSGPVLNGQYAMSQKLHQITSQLSHAFPELHPRPNPEEKPPASLEEKAHV
PMSGQPMGSQMALLANQLGREVDTSLNGRVDLQQFLNGQNLGIMSQMSDIEDDARKNRKYPCPLCGKRFR
FNSILSLHMRTHTGEKPFKCPYCDHRAAQKGNLKIHLRTHKLGNLGKGRGRVREENRLLHELEERAILRD
KQLKGSLLQPRPDLKPPPHAQQAPLAACTLALQANHSVPDVAHPVPSPKPASVQEDAVAPAAGFRCTFCK
GKFKKREELDRHIRILHKPYKCTLCDFAASQEEELISHVEKAHITAESAQGQGPNGGGEQSANEFRCEVC
GQVFSQAWFLKGHMRKHKDSFEHCCQICGRRFKEPWFLKNHMKVHLNKLSVKNKSPSDPEVPVPMGGMSQ
EAHANLYSRYLSCLQSGFMTPDKAGLSEPSQLYGKGELPMKEKEALGKLLSPISSMAHGVPEGDKHSLLG
CLNLVPPLKSSCIERLQAAAKAAEMDPVNSYQAWQLMARGMAMEHGFLSKEHPLQRNHEDTLANAGVLFD
KEKREYVLVGADGSKQKMPADLVHSTKVGSQRDLPSKLDPLESSRDFLSHGLNQTLEYNLQGPGNMKEKP
TECPDCGRVFRTYHQVVVHSRVHKRDRKGEEDGLHVGLDERRGSGSDQESQSVSRSTTPGSSNVTEESGV
GGGLSQTGSAQEDSPHPSSPSSSDIGEEAGRSAGVQQPALLRDRSLGSAMKDCPYCGKTFRTSHHLKVHL
RIHTGEKPYKCPHCDYAGTQSASLKYHLERHHRERQNGAGPLSGQPPNQDHKDEMSSKASLFIRPDILRG
AFKGLPGIDFRGGPASQQWTSGVLSSGDHSGQATGMSSEVPSDALKGTDLPSKSTHFSEIGRAYQSIVSN
GVNFQGSLQAFMDSFVLSSLKKEKDMKDKALADPPSMKVHGVDGGEEKPSGKSSQRKSEKSQYEPLDLSV
RPDAASLPGSSVTVQDSIAWHGCLFCAFTTSSMELMALHLQANHLGKAKRKDNTIGVTVNCKDQAREASK
MALLPSLQSNKDLGLSNMISSLDSASEKMAQGQLKETLGEQKSGAWTGHVDPAFCNFPSDFYKQFGVYPG
MVGSGASSSCPNKEPDGKAHSEEDVPILIPETTSKNTTDDLSDIASSEDMDSSKGENNDEEDVETEPEMM
TKPLSALSKDSSSDGGDSLQPTGTSQPVQGLVSPLSQAPEKQWHSQGLLQAQDPLAGLPKPERGPQSLDK
PMNMLSVLRAYSSDGLAAFNGLASSTANSGCIKRPDLCGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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